Literature DB >> 23074078

Optimizing the performance of local canonical correlation analysis in fMRI using spatial constraints.

Dietmar Cordes1, Mingwu Jin, Tim Curran, Rajesh Nandy.   

Abstract

The benefits of locally adaptive statistical methods for fMRI research have been shown in recent years, as these methods are more proficient in detecting brain activations in a noisy environment. One such method is local canonical correlation analysis (CCA), which investigates a group of neighboring voxels instead of looking at the single voxel time course. The value of a suitable test statistic is used as a measure of activation. It is customary to assign the value to the center voxel for convenience. The method without constraints is prone to artifacts, especially in a region of localized strong activation. To compensate for these deficiencies, the impact of different spatial constraints in CCA on sensitivity and specificity are investigated. The ability of constrained CCA (cCCA) to detect activation patterns in an episodic memory task has been studied. This research shows how any arbitrary contrast of interest can be analyzed by cCCA and how accurate P-values optimized for the contrast of interest can be computed using nonparametric methods. Results indicate an increase of up to 20% in detecting activation patterns for some of the advanced cCCA methods, as measured by ROC curves derived from simulated and real fMRI data.
Copyright © 2011 Wiley Periodicals, Inc.

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Year:  2011        PMID: 23074078      PMCID: PMC5551496          DOI: 10.1002/hbm.21388

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  30 in total

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Authors:  D Cordes; V M Haughton; K Arfanakis; J D Carew; P A Turski; C H Moritz; M A Quigley; M E Meyerand
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2.  Novel ROC-type method for testing the efficiency of multivariate statistical methods in fMRI.

Authors:  Rajesh R Nandy; Dietmar Cordes
Journal:  Magn Reson Med       Date:  2003-06       Impact factor: 4.668

3.  Adaptive analysis of fMRI data.

Authors:  Ola Friman; Magnus Borga; Peter Lundberg; Hans Knutsson
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4.  fMRI analysis with the general linear model: removal of latency-induced amplitude bias by incorporation of hemodynamic derivative terms.

Authors:  V D Calhoun; M C Stevens; G D Pearlson; K A Kiehl
Journal:  Neuroimage       Date:  2004-05       Impact factor: 6.556

5.  Improving the spatial specificity of canonical correlation analysis in fMRI.

Authors:  Rajesh Nandy; Dietmar Cordes
Journal:  Magn Reson Med       Date:  2004-10       Impact factor: 4.668

6.  Analyzing fMRI experiments with structural adaptive smoothing procedures.

Authors:  Karsten Tabelow; Jörg Polzehl; Henning U Voss; Vladimir Spokoiny
Journal:  Neuroimage       Date:  2006-08-04       Impact factor: 6.556

7.  Bayesian fMRI data analysis with sparse spatial basis function priors.

Authors:  Guillaume Flandin; William D Penny
Journal:  Neuroimage       Date:  2006-12-05       Impact factor: 6.556

8.  Activated region fitting: a robust high-power method for fMRI analysis using parameterized regions of activation.

Authors:  Wouter D Weeda; Lourens J Waldorp; Ingrid Christoffels; Hilde M Huizenga
Journal:  Hum Brain Mapp       Date:  2009-08       Impact factor: 5.038

Review 9.  Analyzing for information, not activation, to exploit high-resolution fMRI.

Authors:  Nikolaus Kriegeskorte; Peter Bandettini
Journal:  Neuroimage       Date:  2007-02-27       Impact factor: 6.556

10.  A Bayesian spatiotemporal model for very large data sets.

Authors:  L M Harrison; G G R Green
Journal:  Neuroimage       Date:  2009-12-21       Impact factor: 6.556

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  6 in total

1.  A family of locally constrained CCA models for detecting activation patterns in fMRI.

Authors:  Xiaowei Zhuang; Zhengshi Yang; Tim Curran; Richard Byrd; Rajesh Nandy; Dietmar Cordes
Journal:  Neuroimage       Date:  2016-12-29       Impact factor: 6.556

2.  Multivariate group-level analysis for task fMRI data with canonical correlation analysis.

Authors:  Xiaowei Zhuang; Zhengshi Yang; Karthik R Sreenivasan; Virendra R Mishra; Tim Curran; Rajesh Nandy; Dietmar Cordes
Journal:  Neuroimage       Date:  2019-03-17       Impact factor: 6.556

3.  3D spatially-adaptive canonical correlation analysis: Local and global methods.

Authors:  Zhengshi Yang; Xiaowei Zhuang; Karthik Sreenivasan; Virendra Mishra; Tim Curran; Richard Byrd; Rajesh Nandy; Dietmar Cordes
Journal:  Neuroimage       Date:  2017-12-14       Impact factor: 6.556

4.  Extending local canonical correlation analysis to handle general linear contrasts for FMRI data.

Authors:  Mingwu Jin; Rajesh Nandy; Tim Curran; Dietmar Cordes
Journal:  Int J Biomed Imaging       Date:  2012-01-23

5.  A technical review of canonical correlation analysis for neuroscience applications.

Authors:  Xiaowei Zhuang; Zhengshi Yang; Dietmar Cordes
Journal:  Hum Brain Mapp       Date:  2020-06-27       Impact factor: 5.038

6.  The smoothing artifact of spatially constrained canonical correlation analysis in functional MRI.

Authors:  Dietmar Cordes; Mingwu Jin; Tim Curran; Rajesh Nandy
Journal:  Int J Biomed Imaging       Date:  2012-12-24
  6 in total

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