Literature DB >> 23072817

Ligand electronic properties modulate tau filament binding site density.

Katryna Cisek1, Jordan R Jensen, Nicolette S Honson, Kelsey N Schafer, Grace L Cooper, Jeff Kuret.   

Abstract

Small molecules that bind tau-bearing neurofibrillary lesions are being sought for premortem diagnosis, staging, and treatment of Alzheimer's disease and other tauopathic neurodegenerative diseases. The utility of these agents will depend on both their binding affinity and binding site density (B(max)). Previously we identified polarizability as a descriptor of protein aggregate binding affinity. To examine its contribution to binding site density, we investigated the ability of two closely related benzothiazole derivatives ((E)-2-[[4-(dimethylamino)phenyl]azo]-6-methoxybenzothiazole) and ((E)-2-[2-[4-(dimethylamino)phenyl]ethenyl]-6-methoxybenzothiazole) that differed in polarizability to displace probes of high (Thioflavin S) and low (radiolabeled (E,E)-1-iodo-2,5-bis(3-hydroxycarbonyl-4-methoxy)styrylbenzene; IMSB) density sites. Consistent with their site densities, Thioflavin S completely displaced radiolabeled IMSB, but IMSB was incapable of displacing Thioflavin S. Although both benzothiazoles displaced the low B(max) IMSB probe, only the highly polarizable analog displaced near saturating concentrations of the Thioflavin S probe. Quantum calculations showed that high polarizability reflected extensive pi-electron delocalization fostered by the presence of electron donating and accepting groups. These data suggest that electron delocalization promotes ligand binding at a subset of sites on tau aggregates that are present at high density, and that optimizing this aspect of ligand structure can yield tau-directed agents with superior diagnostic and therapeutic performance.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 23072817      PMCID: PMC3488124          DOI: 10.1016/j.bpc.2012.09.001

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  45 in total

1.  Inhibitors of catalase-amyloid interactions protect cells from beta-amyloid-induced oxidative stress and toxicity.

Authors:  Lila K Habib; Michelle T C Lee; Jerry Yang
Journal:  J Biol Chem       Date:  2010-10-05       Impact factor: 5.157

2.  Ligand-dependent tau filament formation: implications for Alzheimer's disease progression.

Authors:  M E King; V Ahuja; L I Binder; J Kuret
Journal:  Biochemistry       Date:  1999-11-09       Impact factor: 3.162

3.  Evidence for the presence of three distinct binding sites for the thioflavin T class of Alzheimer's disease PET imaging agents on beta-amyloid peptide fibrils.

Authors:  Andrew Lockhart; Liang Ye; Duncan B Judd; Andy T Merritt; Peter N Lowe; Jennifer L Morgenstern; Guizhu Hong; Antony D Gee; John Brown
Journal:  J Biol Chem       Date:  2004-12-21       Impact factor: 5.157

4.  Accurate simulation of optical properties in dyes.

Authors:  Denis Jacquemin; Eric A Perpète; Ilaria Ciofini; Carlo Adamo
Journal:  Acc Chem Res       Date:  2009-02-17       Impact factor: 22.384

5.  Mutation-specific functional impairments in distinct tau isoforms of hereditary FTDP-17.

Authors:  M Hong; V Zhukareva; V Vogelsberg-Ragaglia; Z Wszolek; L Reed; B I Miller; D H Geschwind; T D Bird; D McKeel; A Goate; J C Morris; K C Wilhelmsen; G D Schellenberg; J Q Trojanowski; V M Lee
Journal:  Science       Date:  1998-12-04       Impact factor: 47.728

6.  Ligand polarizability contributes to tau fibril binding affinity.

Authors:  Jordan R Jensen; Katryna Cisek; Nicolette S Honson; Jeff Kuret
Journal:  Bioorg Med Chem       Date:  2011-07-19       Impact factor: 3.641

7.  On the origin of the stronger binding of PIB over thioflavin T to protofibrils of the Alzheimer amyloid-β peptide: a molecular dynamics study.

Authors:  Chun Wu; Michael T Bowers; Joan-Emma Shea
Journal:  Biophys J       Date:  2011-03-02       Impact factor: 4.033

8.  Detection of amyloid plaques by radioligands for Abeta40 and Abeta42: potential imaging agents in Alzheimer's patients.

Authors:  Mei-Ping Kung; Daniel M Skovronsky; Catherine Hou; Zhi-Ping Zhuang; Tamar L Gur; Bin Zhang; John Q Trojanowski; Virginia M-Y Lee; Hank F Kung
Journal:  J Mol Neurosci       Date:  2003-02       Impact factor: 3.444

9.  The potential for beta-structure in the repeat domain of tau protein determines aggregation, synaptic decay, neuronal loss, and coassembly with endogenous Tau in inducible mouse models of tauopathy.

Authors:  Maria-Magdalena Mocanu; Astrid Nissen; Katrin Eckermann; Inna Khlistunova; Jacek Biernat; Dagmar Drexler; Olga Petrova; Kai Schönig; Hermann Bujard; Eckhard Mandelkow; Lepu Zhou; Gabriele Rune; Eva-Maria Mandelkow
Journal:  J Neurosci       Date:  2008-01-16       Impact factor: 6.167

10.  Binding modes of thioflavin-T to the single-layer beta-sheet of the peptide self-assembly mimics.

Authors:  Chun Wu; Matthew Biancalana; Shohei Koide; Joan-Emma Shea
Journal:  J Mol Biol       Date:  2009-09-30       Impact factor: 5.469

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  4 in total

Review 1.  In Silico Studies in Drug Research Against Neurodegenerative Diseases.

Authors:  Farahnaz Rezaei Makhouri; Jahan B Ghasemi
Journal:  Curr Neuropharmacol       Date:  2018       Impact factor: 7.363

Review 2.  Structure and mechanism of action of tau aggregation inhibitors.

Authors:  Katryna Cisek; Grace L Cooper; Carol J Huseby; Jeff Kuret
Journal:  Curr Alzheimer Res       Date:  2014       Impact factor: 3.498

3.  Structural determinants of Tau aggregation inhibitor potency.

Authors:  Kelsey N Schafer; Katryna Cisek; Carol J Huseby; Edward Chang; Jeff Kuret
Journal:  J Biol Chem       Date:  2013-09-26       Impact factor: 5.157

Review 4.  Interactions between Microtubule-Associated Protein Tau (MAPT) and Small Molecules.

Authors:  Jennifer N Rauch; Steven H Olson; Jason E Gestwicki
Journal:  Cold Spring Harb Perspect Med       Date:  2017-07-05       Impact factor: 6.915

  4 in total

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