Literature DB >> 23065554

Native RNA purification by gel filtration chromatography.

Evan P Booy1, Hui Meng, Sean A McKenna.   

Abstract

In vitro transcription of RNA from DNA templates by T7 RNA polymerase allows for the generation of large quantities of RNA suitable for many downstream applications. The resulting RNA can be purified by a number of methodologies. Herein, we describe the native isolation of RNA molecules by FPLC purification using Superdex 75 or 200 gel filtration columns. This approach can be extended to purify biologically interesting RNA complexes such as RNA-protein complexes that have been generated from either synthetic or in vitro transcribed RNAs and recombinant proteins.

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Year:  2012        PMID: 23065554     DOI: 10.1007/978-1-62703-113-4_6

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  7 in total

1.  RNA Helicase Associated with AU-rich Element (RHAU/DHX36) Interacts with the 3'-Tail of the Long Non-coding RNA BC200 (BCYRN1).

Authors:  Evan P Booy; Ewan K S McRae; Ryan Howard; Soumya R Deo; Emmanuel O Ariyo; Edis Dzananovic; Markus Meier; Jörg Stetefeld; Sean A McKenna
Journal:  J Biol Chem       Date:  2016-01-05       Impact factor: 5.157

2.  Comprehensive analysis of the BC200 ribonucleoprotein reveals a reciprocal regulatory function with CSDE1/UNR.

Authors:  Evan P Booy; Ewan Ks McRae; Peyman Ezzati; Taegi Choi; Daniel Gussakovsky; Sean A McKenna
Journal:  Nucleic Acids Res       Date:  2018-11-30       Impact factor: 16.971

3.  The long non-coding RNA BC200 (BCYRN1) is critical for cancer cell survival and proliferation.

Authors:  Evan P Booy; Ewan Ks McRae; Amit Koul; Francis Lin; Sean A McKenna
Journal:  Mol Cancer       Date:  2017-06-26       Impact factor: 27.401

4.  An RNA guanine quadruplex regulated pathway to TRAIL-sensitization by DDX21.

Authors:  Ewan K S McRae; Steven J Dupas; Evan P Booy; Ramanaguru S Piragasam; Richard P Fahlman; Sean A McKenna
Journal:  RNA       Date:  2019-10-25       Impact factor: 4.942

5.  Biophysical Characterization of G-Quadruplex Recognition in the PITX1 mRNA by the Specificity Domain of the Helicase RHAU.

Authors:  Emmanuel O Ariyo; Evan P Booy; Trushar R Patel; Edis Dzananovic; Ewan K McRae; Markus Meier; Kevin McEleney; Jorg Stetefeld; Sean A McKenna
Journal:  PLoS One       Date:  2015-12-09       Impact factor: 3.240

6.  Activation of 2' 5'-oligoadenylate synthetase by stem loops at the 5'-end of the West Nile virus genome.

Authors:  Soumya Deo; Trushar R Patel; Edis Dzananovic; Evan P Booy; Khalid Zeid; Kevin McEleney; Stephen E Harding; Sean A McKenna
Journal:  PLoS One       Date:  2014-03-20       Impact factor: 3.240

7.  The RNA helicase RHAU (DHX36) suppresses expression of the transcription factor PITX1.

Authors:  Evan P Booy; Ryan Howard; Oksana Marushchak; Emmanuel O Ariyo; Markus Meier; Stefanie K Novakowski; Soumya R Deo; Edis Dzananovic; Jörg Stetefeld; Sean A McKenna
Journal:  Nucleic Acids Res       Date:  2013-12-24       Impact factor: 16.971

  7 in total

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