Literature DB >> 23052876

Metabonomic classification and detection of small molecule biomarkers of malignant pleural effusions.

Xian-Mei Zhou1, Cui-Cui He, Yu-Mei Liu, Yang Zhao, Dan Zhao, Yun Du, Wei-Yi Zheng, Jian-Xin Li.   

Abstract

To date, most research has been focused on the benign molecules in pleural effusions, and diagnosis of malignant ones still remains challenging. In the present study, targeting the small molecules as potential biomarkers to predict the malignancy of the effusions, the metabolic profiles of 81 clinical pleural effusions (41 malignant effusions from lung cancer and 40 benign ones) were investigated through a NMR-based metabonomic approach. In (1)H NMR analysis, a total of ten small molecules in the effusions were simultaneously determined. Significantly higher mean values of valine, lactate, and alanine and markedly lower signal intensities of acetoacetate, trimethylamine-N-oxide, and α- and β-glucose were observed in malignant pleural effusions compared with those in benign ones. DFA modeling of NMR spectra subjected to a validation allowed the malignant effusions to be discriminated from benign ones in both training and validation groups. Currently, the conventional clinical analyses on chemical constituents in effusions could not provide a reliable prediction of malignancy of the effusions; the present results revealed that the small molecules might serve as useful biomarkers for diagnosis of the effusions, and the present NMR-based metabonomic approach provided a valuable potential to rapidly and sensitively predict the malignancy of the pleural effusions.

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Year:  2012        PMID: 23052876     DOI: 10.1007/s00216-012-6432-6

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  6 in total

1.  Lipidomic Profiling of Lung Pleural Effusion Identifies Unique Metabotype for EGFR Mutants in Non-Small Cell Lung Cancer.

Authors:  Ying Swan Ho; Lian Yee Yip; Nurhidayah Basri; Vivian Su Hui Chong; Chin Chye Teo; Eddy Tan; Kah Ling Lim; Gek San Tan; Xulei Yang; Si Yong Yeo; Mariko Si Yue Koh; Anantham Devanand; Angela Takano; Eng Huat Tan; Daniel Shao Weng Tan; Tony Kiat Hon Lim
Journal:  Sci Rep       Date:  2016-10-14       Impact factor: 4.379

2.  Nuclear magnetic resonance-based serum metabolic profiling of dairy cows with footrot.

Authors:  Jiasan Zheng; Lingwei Sun; Shi Shu; Kuiling Zhu; Chuang Xu; Junsong Wang; Hongbin Wang
Journal:  J Vet Med Sci       Date:  2016-06-18       Impact factor: 1.267

3.  1H-NMR spectroscopy metabonomics of reactive, ovarian carcinoma and hepatocellular carcinoma ascites.

Authors:  Lucio Zennaro; Lorenzo Nicolè; Paola Vanzani; Filippo Cappello; Ambrogio Fassina
Journal:  Pleura Peritoneum       Date:  2020-05-12

4.  Machine learning applied to near-infrared spectra for clinical pleural effusion classification.

Authors:  Zhongjian Chen; Keke Chen; Yan Lou; Jing Zhu; Weimin Mao; Zhengbo Song
Journal:  Sci Rep       Date:  2021-05-03       Impact factor: 4.379

5.  In-silico prediction of key metabolic differences between two non-small cell lung cancer subtypes.

Authors:  Alberto Rezola; Jon Pey; Ángel Rubio; Francisco J Planes
Journal:  PLoS One       Date:  2014-08-05       Impact factor: 3.240

Review 6.  Biomarkers in the diagnosis of pleural diseases: a 2018 update.

Authors:  José M Porcel
Journal:  Ther Adv Respir Dis       Date:  2018 Jan-Dec       Impact factor: 4.031

  6 in total

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