Literature DB >> 23045492

Genome sequence of Pseudomonas aeruginosa strain AH16, isolated from a patient with chronic pneumonia in China.

Da-Qiang Wu1, Huijuan Cheng, Changzhong Wang, Changfeng Zhang, Yan Wang, Jing Shao, Qiangjun Duan.   

Abstract

Pseudomonas aeruginosa AH16 is a virulent strain isolated from a patient with chronic pneumonia in China. Here, we present a 6.8-Mb (G+C content, 66.13%) assembly of its genome with 6,332 putative coding sequences, which may provide insights into the genomic basis of activity of the clinical P. aeruginosa strain in China.

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Year:  2012        PMID： 23045492      PMCID： PMC3486088          DOI： 10.1128/JB.01451-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

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Journal:  Zhonghua Jie He He Hu Xi Za Zhi       Date:  2006-01

2.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

Review 4.  The accessory genome of Pseudomonas aeruginosa.

Authors:  Vanderlene L Kung; Egon A Ozer; Alan R Hauser
Journal:  Microbiol Mol Biol Rev       Date:  2010-12       Impact factor: 11.056

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Authors:  Yucheng Shao; Xinyi He; Ewan M Harrison; Cui Tai; Hong-Yu Ou; Kumar Rajakumar; Zixin Deng
Journal:  Nucleic Acids Res       Date:  2010-04-30       Impact factor: 16.971

6.  [Risk factors and clinical outcomes of nosocomial infections caused by multidrug resistant Pseudomonas aeruginosa].

Authors:  Bin Cao; Hui Wang; Yuan-jue Zhu; Ming-jun Chen
Journal:  Zhonghua Jie He He Hu Xi Za Zhi       Date:  2004-01

7.  NCBI Reference Sequences: current status, policy and new initiatives.

Authors:  Kim D Pruitt; Tatiana Tatusova; William Klimke; Donna R Maglott
Journal:  Nucleic Acids Res       Date:  2008-10-16       Impact factor: 16.971

8.  ARDB--Antibiotic Resistance Genes Database.

Authors:  Bo Liu; Mihai Pop
Journal:  Nucleic Acids Res       Date:  2008-10-02       Impact factor: 16.971

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

10.  KAAS: an automatic genome annotation and pathway reconstruction server.

Authors:  Yuki Moriya; Masumi Itoh; Shujiro Okuda; Akiyasu C Yoshizawa; Minoru Kanehisa
Journal:  Nucleic Acids Res       Date:  2007-05-25       Impact factor: 16.971
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  2 in total

1.  The rulB gene of plasmid pWW0 is a hotspot for the site-specific insertion of integron-like elements found in the chromosomes of environmental Pseudomonas fluorescens group bacteria.

Authors:  Glenn Rhodes; Hester Bosma; David Studholme; Dawn L Arnold; Robert W Jackson; Roger W Pickup
Journal:  Environ Microbiol       Date:  2014-01-07       Impact factor: 5.491

2.  Recognition of Protein-coding Genes Based on Z-curve Algorithms.

Authors:  Feng -Biao Guo; Yan Lin; Ling -Ling Chen
Journal:  Curr Genomics       Date:  2014-04       Impact factor: 2.236
  2 in total

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