Literature DB >> 23043466

Active intermediates of polyhydroxyalkanoate synthase from Aeromonas caviae in polymerization reaction.

Keiji Numata1, Yoko Motoda, Satoru Watanabe, Naoya Tochio, Takanori Kigawa, Yoshiharu Doi.   

Abstract

Polyhydroxyalkanoate (PHA) synthase from Aeromonas caviae FA440 (PhaC(Ac), BAA21815) is one of the most valuable PHA synthase, because of its function to synthesize a practical bioplastic, poly[(R)-3-hydroxybutyrate-co-(R)-3-hydroxyhexanoate] [P(3HB-co-3HHx)]. However, biochemical activity and active intermediates of PhaC(Ac) have not been clarified until now. In the present study, a gene of PhaC(Ac) was cloned and overexpressed by a cell-free protein expression system. Both the polymerization activity and oligomerization behavior of the purified PhaC(Ac) were characterized in order to clarify the active intermediates of PhaC(Ac) based on the hydrodynamic diameters and specific activities of PhaC(Ac). The influences of a substrate, (R)-3-hydroxybutyryl-CoA (3HB-CoA), on the oligomerization of PhaC(Ac) (7.5 μM) were also investigated, and then the Hill coefficient (n = 2.6 ± 0.4) and the microscopic dissociation constant (K(m) = 77 ± 5 μM) were determined. Based on the results, the active intermediate of PhaC(Ac) was concluded to be the dimeric PhaC(Ac) containing 3HB-CoA as an activator for its dimerization. This information is critical for revealing the relationships between its dimerization and function in PHA synthesis.

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Year:  2012        PMID: 23043466     DOI: 10.1021/bm301276k

Source DB:  PubMed          Journal:  Biomacromolecules        ISSN: 1525-7797            Impact factor:   6.988


  8 in total

1.  Computational study on the polymerization reaction of d-aminopeptidase for the synthesis of d-peptides.

Authors:  Joan Gimenez-Dejoz; Kousuke Tsuchiya; Ayaka Tateishi; Yoko Motoda; Takanori Kigawa; Yasuhisa Asano; Keiji Numata
Journal:  RSC Adv       Date:  2020-05-06       Impact factor: 4.036

2.  Phasin proteins activate Aeromonas caviae polyhydroxyalkanoate (PHA) synthase but not Ralstonia eutropha PHA synthase.

Authors:  Kazunori Ushimaru; Yoko Motoda; Keiji Numata; Takeharu Tsuge
Journal:  Appl Environ Microbiol       Date:  2014-02-28       Impact factor: 4.792

3.  Characterization of site-specific mutations in a short-chain-length/medium-chain-length polyhydroxyalkanoate synthase: in vivo and in vitro studies of enzymatic activity and substrate specificity.

Authors:  Jo-Ann Chuah; Satoshi Tomizawa; Miwa Yamada; Takeharu Tsuge; Yoshiharu Doi; Kumar Sudesh; Keiji Numata
Journal:  Appl Environ Microbiol       Date:  2013-04-12       Impact factor: 4.792

4.  Intracellular Delivery of Proteins via Fusion Peptides in Intact Plants.

Authors:  Kiaw Kiaw Ng; Yoko Motoda; Satoru Watanabe; Ahmad Sofiman Othman; Takanori Kigawa; Yutaka Kodama; Keiji Numata
Journal:  PLoS One       Date:  2016-04-21       Impact factor: 3.240

5.  Class I Polyhydroxyalkanoate Synthase from the Purple Photosynthetic Bacterium Rhodovulum sulfidophilum Predominantly Exists as a Functional Dimer in the Absence of a Substrate.

Authors:  Mieko Higuchi-Takeuchi; Yoko Motoda; Takanori Kigawa; Keiji Numata
Journal:  ACS Omega       Date:  2017-08-29

Review 6.  Marine Purple Photosynthetic Bacteria as Sustainable Microbial Production Hosts.

Authors:  Mieko Higuchi-Takeuchi; Keiji Numata
Journal:  Front Bioeng Biotechnol       Date:  2019-10-11

7.  Mechanistic insight with HBCH2CoA as a probe to polyhydroxybutyrate (PHB) synthases.

Authors:  Wei Zhang; Ruben Shrestha; Rachael M Buckley; Jamie Jewell; Stefan H Bossmann; JoAnne Stubbe; Ping Li
Journal:  ACS Chem Biol       Date:  2014-06-16       Impact factor: 5.100

8.  Biosynthesis of polyhydroxyalkanoates containing hydroxyl group from glycolate in Escherichia coli.

Authors:  Chayatip Insomphun; Shingo Kobayashi; Tetsuya Fujiki; Keiji Numata
Journal:  AMB Express       Date:  2016-04-14       Impact factor: 3.298

  8 in total

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