Literature DB >> 23043354

Exome sequencing: an efficient diagnostic tool for complex neurodegenerative disorders.

M B Hammer1,2, G Eleuch-Fayache1, J R Gibbs2,3, S K Arepalli2, S B Chong2, C Sassi2,3, Y Bouhlal4, F Hentati1, R Amouri1, A B Singleton2.   

Abstract

BACKGROUND AND
PURPOSE: Autosomal recessive cerebellar ataxia (ARCA) comprises a large and heterogeneous group of neurodegenerative disorders. We studied three families diagnosed with ARCA.
METHODS: To determine the gene lesions responsible for their disorders, we performed high-density single-nucleotide polymorphism genotyping and exome sequencing.
RESULTS: We identified a new mutation in the SACS gene and a known mutation in SPG11. Notably, we also identified a homozygous variant in APOB, a gene previously associated with ataxia.
CONCLUSIONS: These findings demonstrate that exome sequencing is an efficient and direct diagnostic tool for identifying the causes of complex and genetically heterogeneous neurodegenerative diseases, early-stage disease or cases with limited clinical data. Published 2012. This article is a U.S. Government work and is in the public domain in the USA. European Journal of Neurology
© 2012 EFNS.

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Year:  2012        PMID: 23043354      PMCID: PMC4669564          DOI: 10.1111/j.1468-1331.2012.03883.x

Source DB:  PubMed          Journal:  Eur J Neurol        ISSN: 1351-5101            Impact factor:   6.089


  16 in total

Review 1.  A novel homozygous SACS mutation identified by whole exome sequencing-genotype phenotype correlations of all published cases.

Authors:  Georgia Xiromerisiou; Katerina Dadouli; Chrysoula Marogianni; Antonios Provatas; Panagiotis Ntellas; Dimitrios Rikos; Pantelis Stathis; Despina Georgouli; Gedeon Loules; Maria Zamanakou; Georgios M Hadjigeorgiou
Journal:  J Mol Neurosci       Date:  2019-11-07       Impact factor: 3.444

2.  Multiple analyses indicate the specific association of NR1I3, C6 and TNN with low hip BMD risk.

Authors:  Ying-Ying Han; Lan-Juan Zhao; Yong Lin; Hao He; Qing Tian; Wei Zhu; Hui Shen; Xiang-Ding Chen; Hong-Wen Deng
Journal:  J Genet Genomics       Date:  2017-05-08       Impact factor: 4.275

3.  SLC25A46 Mutations Associated with Autosomal Recessive Cerebellar Ataxia in North African Families.

Authors:  Monia B Hammer; Jinhui Ding; Fanny Mochel; Ghada Eleuch-Fayache; Perrine Charles; Marie Coutelier; J Raphael Gibbs; Sampath K Arepalli; Sean B Chong; Dena G Hernandez; Elisa Majounie; Steven Clipman; Yosr Bouhlal; Houda Nehdi; Alexis Brice; Faycal Hentati; Giovanni Stevanin; Rim Amouri; Alexandra Durr; Andrew B Singleton
Journal:  Neurodegener Dis       Date:  2017-05-31       Impact factor: 2.977

4.  Whole-exome sequencing as a diagnostic tool in a family with episodic ataxia type 1.

Authors:  Pawel Tacik; Kimberly J Guthrie; Audrey J Strongosky; Daniel F Broderick; Douglas L Riegert-Johnson; Sha Tang; Dima El-Khechen; Alexander S Parker; Owen A Ross; Zbigniew K Wszolek
Journal:  Mayo Clin Proc       Date:  2015-02-03       Impact factor: 7.616

5.  Autosomal recessive adult onset ataxia.

Authors:  Nataša Dragašević-Mišković; Iva Stanković; Andona Milovanović; Vladimir S Kostić
Journal:  J Neurol       Date:  2021-09-09       Impact factor: 4.849

Review 6.  Next-generation sequencing diagnostics for neurological diseases/disorders: from a clinical perspective.

Authors:  Jia Nee Foo; Jianjun Liu; Eng-King Tan
Journal:  Hum Genet       Date:  2013-03-23       Impact factor: 4.132

7.  Cerebellar ataxia-dominant phenotype in patients with ERCC4 mutations.

Authors:  Hiroshi Doi; Shigeru Koyano; Satoko Miyatake; Shinji Nakajima; Yuka Nakazawa; Misako Kunii; Atsuko Tomita-Katsumoto; Kayoko Oda; Yukie Yamaguchi; Ryoko Fukai; Shingo Ikeda; Rumiko Kato; Katsuhisa Ogata; Shun Kubota; Noriko Hayashi; Keita Takahashi; Mikiko Tada; Kenichi Tanaka; Mitsuko Nakashima; Yoshinori Tsurusaki; Noriko Miyake; Hirotomo Saitsu; Tomoo Ogi; Michiko Aihara; Hideyuki Takeuchi; Naomichi Matsumoto; Fumiaki Tanaka
Journal:  J Hum Genet       Date:  2018-02-05       Impact factor: 3.172

8.  ELOVL5 mutations cause spinocerebellar ataxia 38.

Authors:  Eleonora Di Gregorio; Barbara Borroni; Elisa Giorgio; Daniela Lacerenza; Marta Ferrero; Nicola Lo Buono; Neftj Ragusa; Cecilia Mancini; Marion Gaussen; Alessandro Calcia; Nico Mitro; Eriola Hoxha; Isabella Mura; Domenico A Coviello; Young-Ah Moon; Christelle Tesson; Giovanna Vaula; Philippe Couarch; Laura Orsi; Eleonora Duregon; Mauro Giulio Papotti; Jean-François Deleuze; Jean Imbert; Chiara Costanzi; Alessandro Padovani; Paola Giunti; Marcel Maillet-Vioud; Alexandra Durr; Alexis Brice; Filippo Tempia; Ada Funaro; Loredana Boccone; Donatella Caruso; Giovanni Stevanin; Alfredo Brusco
Journal:  Am J Hum Genet       Date:  2014-07-24       Impact factor: 11.025

9.  Purifying selection in deeply conserved human enhancers is more consistent than in coding sequences.

Authors:  Dilrini R De Silva; Richard Nichols; Greg Elgar
Journal:  PLoS One       Date:  2014-07-25       Impact factor: 3.240

10.  Exome sequencing circumvents missing clinical data and identifies a BSCL2 mutation in congenital lipodystrophy.

Authors:  Jens Schuster; Tahir Naeem Khan; Muhammad Tariq; Pakeeza Arzoo Shaiq; Katrin Mäbert; Shahid Mahmood Baig; Joakim Klar
Journal:  BMC Med Genet       Date:  2014-06-24       Impact factor: 2.103

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