Literature DB >> 23042526

Quantitative fluorescent speckle microscopy (QFSM) to measure actin dynamics.

Michelle C Mendoza1, Sebastien Besson, Gaudenz Danuser.   

Abstract

Quantitative fluorescent speckle microscopy (QFSM) is a live-cell imaging method to analyze the dynamics of macromolecular assemblies with high spatial and temporal resolution. Its greatest successes were in the analysis of actin filament and adhesion dynamics in the context of cell migration and microtubule dynamics in interphase and the meiotic/mitotic spindle. Here, focus is on the former application to illustrate the procedures of FSM imaging and the computational image processing that extracts quantitative information from these experiments. QFSM is advantageous over other methods because it measures the movement and turnover kinetics of the actin filament (F-actin) network in living cells across the entire field of view. Experiments begin with the microinjection of fluorophore-labeled actin into cells, which generate a low ratio of fluorescently labeled to endogenously unlabeled actin monomers. Spinning disk confocal or wide-field imaging then visualizes fluorophore clusters (two to eight actin monomers) within the assembled F-actin network as speckles. QFSM software identifies and computationally tracks and utilizes the location, appearance, and disappearance of speckles to derive network flows and maps of the rate of filament assembly and disassembly.
© 2012 by John Wiley & Sons, Inc.

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Year:  2012        PMID: 23042526      PMCID: PMC3688286          DOI: 10.1002/0471142956.cy0218s62

Source DB:  PubMed          Journal:  Curr Protoc Cytom        ISSN: 1934-9297


  18 in total

1.  Computational analysis of F-actin turnover in cortical actin meshworks using fluorescent speckle microscopy.

Authors:  A Ponti; P Vallotton; W C Salmon; C M Waterman-Storer; G Danuser
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

2.  Automatic fluorescent tag detection in 3D with super-resolution: application to the analysis of chromosome movement.

Authors:  D Thomann; D R Rines; P K Sorger; G Danuser
Journal:  J Microsc       Date:  2002-10       Impact factor: 1.758

3.  Differential transmission of actin motion within focal adhesions.

Authors:  Ke Hu; Lin Ji; Kathryn T Applegate; Gaudenz Danuser; Clare M Waterman-Storer
Journal:  Science       Date:  2007-01-05       Impact factor: 47.728

4.  Protrusion and actin assembly are coupled to the organization of lamellar contractile structures.

Authors:  James I Lim; Mohsen Sabouri-Ghomi; Matthias Machacek; Clare M Waterman; Gaudenz Danuser
Journal:  Exp Cell Res       Date:  2010-04-18       Impact factor: 3.905

5.  Cofilin activity downstream of Pak1 regulates cell protrusion efficiency by organizing lamellipodium and lamella actin networks.

Authors:  Violaine Delorme; Matthias Machacek; Céline DerMardirossian; Karen L Anderson; Torsten Wittmann; Dorit Hanein; Clare Waterman-Storer; Gaudenz Danuser; Gary M Bokoch
Journal:  Dev Cell       Date:  2007-11       Impact factor: 12.270

6.  Live cell imaging of F-actin dynamics via Fluorescent Speckle Microscopy (FSM).

Authors:  James Lim; Gaudenz Danuser
Journal:  J Vis Exp       Date:  2009-08-05       Impact factor: 1.355

7.  How we discovered fluorescent speckle microscopy.

Authors:  E D Salmon; Clare M Waterman
Journal:  Mol Biol Cell       Date:  2011-11       Impact factor: 4.138

8.  Robust single-particle tracking in live-cell time-lapse sequences.

Authors:  Khuloud Jaqaman; Dinah Loerke; Marcel Mettlen; Hirotaka Kuwata; Sergio Grinstein; Sandra L Schmid; Gaudenz Danuser
Journal:  Nat Methods       Date:  2008-07-20       Impact factor: 28.547

9.  Dual-wavelength fluorescent speckle microscopy reveals coupling of microtubule and actin movements in migrating cells.

Authors:  Wendy C Salmon; Michael C Adams; Clare M Waterman-Storer
Journal:  J Cell Biol       Date:  2002-07-08       Impact factor: 10.539

10.  Fluctuations of intracellular forces during cell protrusion.

Authors:  Lin Ji; James Lim; Gaudenz Danuser
Journal:  Nat Cell Biol       Date:  2008-11-16       Impact factor: 28.824

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  17 in total

1.  Dissecting protein reaction dynamics in living cells by fluorescence recovery after photobleaching.

Authors:  Marco Fritzsche; Guillaume Charras
Journal:  Nat Protoc       Date:  2015-04-02       Impact factor: 13.491

2.  ERK reinforces actin polymerization to power persistent edge protrusion during motility.

Authors:  Michelle C Mendoza; Marco Vilela; Jesus E Juarez; John Blenis; Gaudenz Danuser
Journal:  Sci Signal       Date:  2015-05-19       Impact factor: 8.192

Review 3.  Xenopus laevis as a model system to study cytoskeletal dynamics during axon pathfinding.

Authors:  Paula G Slater; Laurie Hayrapetian; Laura Anne Lowery
Journal:  Genesis       Date:  2017-01       Impact factor: 2.487

4.  Inducible fluorescent speckle microscopy.

Authors:  António J Pereira; Paulo Aguiar; Michael Belsley; Helder Maiato
Journal:  J Cell Biol       Date:  2016-01-18       Impact factor: 10.539

5.  Membrane protein dynamics and functional implications in mammalian cells.

Authors:  Francis J Alenghat; David E Golan
Journal:  Curr Top Membr       Date:  2013       Impact factor: 3.049

Review 6.  Direct measurement of intracellular pressure.

Authors:  Ryan J Petrie; Hyun Koo
Journal:  Curr Protoc Cell Biol       Date:  2014-06-03

Review 7.  Fluorescence live cell imaging.

Authors:  Andreas Ettinger; Torsten Wittmann
Journal:  Methods Cell Biol       Date:  2014       Impact factor: 1.441

8.  Live Imaging of Cytoskeletal Dynamics in Embryonic Xenopus laevis Growth Cones and Neural Crest Cells.

Authors:  Burcu Erdogan; Elizabeth A Bearce; Laura Anne Lowery
Journal:  Cold Spring Harb Protoc       Date:  2021-04-01

9.  Actin flow-dependent and -independent force transmission through integrins.

Authors:  Tristan P Driscoll; Sang Joon Ahn; Billy Huang; Abhishek Kumar; Martin A Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-01       Impact factor: 12.779

10.  Automated tracking of S. pombe spindle elongation dynamics.

Authors:  Ana Sofía M Uzsoy; Parsa Zareiesfandabadi; Jamie Jennings; Alexander F Kemper; Mary Williard Elting
Journal:  J Microsc       Date:  2021-07-08       Impact factor: 1.952

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