Literature DB >> 23042114

Genome-wide association study identifies eight new susceptibility loci for atopic dermatitis in the Japanese population.

Tomomitsu Hirota1, Atsushi Takahashi, Michiaki Kubo, Tatsuhiko Tsunoda, Kaori Tomita, Masafumi Sakashita, Takechiyo Yamada, Shigeharu Fujieda, Shota Tanaka, Satoru Doi, Akihiko Miyatake, Tadao Enomoto, Chiharu Nishiyama, Nobuhiro Nakano, Keiko Maeda, Ko Okumura, Hideoki Ogawa, Shigaku Ikeda, Emiko Noguchi, Tohru Sakamoto, Nobuyuki Hizawa, Koji Ebe, Hidehisa Saeki, Takashi Sasaki, Tamotsu Ebihara, Masayuki Amagai, Satoshi Takeuchi, Masutaka Furue, Yusuke Nakamura, Mayumi Tamari.   

Abstract

Atopic dermatitis is a common inflammatory skin disease caused by interaction of genetic and environmental factors. On the basis of data from a genome-wide association study (GWAS) and a validation study comprising a total of 3,328 subjects with atopic dermatitis and 14,992 controls in the Japanese population, we report here 8 new susceptibility loci: IL1RL1-IL18R1-IL18RAP (P(combined) = 8.36 × 10(-18)), the major histocompatibility complex (MHC) region (P = 8.38 × 10(-20)), OR10A3-NLRP10 (P = 1.54 × 10(-22)), GLB1 (P = 2.77 × 10(-16)), CCDC80 (P = 1.56 × 10(-19)), CARD11 (P = 7.83 × 10(-9)), ZNF365 (P = 5.85 × 10(-20)) and CYP24A1-PFDN4 (P = 1.65 × 10(-8)). We also replicated the associations of the FLG, C11orf30, TMEM232-SLC25A46, TNFRSF6B-ZGPAT, OVOL1, ACTL9 and KIF3A-IL13 loci that were previously reported in GWAS of European and Chinese individuals and a meta-analysis of GWAS for atopic dermatitis. These findings advance the understanding of the genetic basis of atopic dermatitis.

Entities:  

Mesh:

Year:  2012        PMID: 23042114     DOI: 10.1038/ng.2438

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  38 in total

1.  Principal components analysis corrects for stratification in genome-wide association studies.

Authors:  Alkes L Price; Nick J Patterson; Robert M Plenge; Michael E Weinblatt; Nancy A Shadick; David Reich
Journal:  Nat Genet       Date:  2006-07-23       Impact factor: 38.330

Review 2.  The BioBank Japan Project.

Authors:  Yusuke Nakamura
Journal:  Clin Adv Hematol Oncol       Date:  2007-09

3.  Genome-wide association study identifies five new susceptibility loci for prostate cancer in the Japanese population.

Authors:  Ryo Takata; Shusuke Akamatsu; Michiaki Kubo; Atsushi Takahashi; Naoya Hosono; Takahisa Kawaguchi; Tatsuhiko Tsunoda; Johji Inazawa; Naoyuki Kamatani; Osamu Ogawa; Tomoaki Fujioka; Yusuke Nakamura; Hidewaki Nakagawa
Journal:  Nat Genet       Date:  2010-08-01       Impact factor: 38.330

4.  Peroxisome proliferator-activated receptor γ-mediated suppression of dendritic cell function prevents the onset of atopic dermatitis in NC/Tnd mice.

Authors:  Kyungsook Jung; Akane Tanaka; Hiroshi Fujita; Akira Matsuda; Kumiko Oida; Kaoru Karasawa; Noriko Okamoto; Keitaro Ohmori; Youngheun Jee; Taekyun Shin; Hiroshi Matsuda
Journal:  J Allergy Clin Immunol       Date:  2011-01-05       Impact factor: 10.793

5.  IL-1F5, -F6, -F8, and -F9: a novel IL-1 family signaling system that is active in psoriasis and promotes keratinocyte antimicrobial peptide expression.

Authors:  Andrew Johnston; Xianying Xing; Andrew M Guzman; MaryBeth Riblett; Candace M Loyd; Nicole L Ward; Christian Wohn; Errol P Prens; Frank Wang; Lisa E Maier; Sewon Kang; John J Voorhees; James T Elder; Johann E Gudjonsson
Journal:  J Immunol       Date:  2011-01-17       Impact factor: 5.422

6.  Bidirectional modulation of adipogenesis by the secreted protein Ccdc80/DRO1/URB.

Authors:  Frédéric Tremblay; Tracy Revett; Christine Huard; Ying Zhang; James F Tobin; Robert V Martinez; Ruth E Gimeno
Journal:  J Biol Chem       Date:  2009-01-13       Impact factor: 5.157

Review 7.  Genotype imputation.

Authors:  Yun Li; Cristen Willer; Serena Sanna; Gonçalo Abecasis
Journal:  Annu Rev Genomics Hum Genet       Date:  2009       Impact factor: 8.929

8.  Cell type-specific regulation of ITAM-mediated NF-kappaB activation by the adaptors, CARMA1 and CARD9.

Authors:  Hiromitsu Hara; Chitose Ishihara; Arata Takeuchi; Liquan Xue; Stephan W Morris; Josef M Penninger; Hiroki Yoshida; Takashi Saito
Journal:  J Immunol       Date:  2008-07-15       Impact factor: 5.422

9.  A genome-wide meta-analysis of genetic variants associated with allergic rhinitis and grass sensitization and their interaction with birth order.

Authors:  Adaikalavan Ramasamy; Ivan Curjuric; Lachlan J Coin; Ashish Kumar; Wendy L McArdle; Medea Imboden; Benedicte Leynaert; Manolis Kogevinas; Peter Schmid-Grendelmeier; Juha Pekkanen; Matthias Wjst; Andreas J Bircher; Ulla Sovio; Thierry Rochat; Anna-Liisa Hartikainen; David J Balding; Marjo-Riitta Jarvelin; Nicole Probst-Hensch; David P Strachan; Deborah L Jarvis
Journal:  J Allergy Clin Immunol       Date:  2011-11       Impact factor: 10.793

Review 10.  Gene map of the extended human MHC.

Authors:  Roger Horton; Laurens Wilming; Vikki Rand; Ruth C Lovering; Elspeth A Bruford; Varsha K Khodiyar; Michael J Lush; Sue Povey; C Conover Talbot; Mathew W Wright; Hester M Wain; John Trowsdale; Andreas Ziegler; Stephan Beck
Journal:  Nat Rev Genet       Date:  2004-12       Impact factor: 53.242

View more
  117 in total

1.  Genome-wide meta-analyses of stratified depression in Generation Scotland and UK Biobank.

Authors:  Lynsey S Hall; Mark J Adams; Aleix Arnau-Soler; Toni-Kim Clarke; David M Howard; Yanni Zeng; Gail Davies; Saskia P Hagenaars; Ana Maria Fernandez-Pujals; Jude Gibson; Eleanor M Wigmore; Thibaud S Boutin; Caroline Hayward; Generation Scotland; David J Porteous; Ian J Deary; Pippa A Thomson; Chris S Haley; Andrew M McIntosh
Journal:  Transl Psychiatry       Date:  2018-01-10       Impact factor: 6.222

Review 2.  Physiological and pathological roles of mitochondrial SLC25 carriers.

Authors:  Manuel Gutiérrez-Aguilar; Christopher P Baines
Journal:  Biochem J       Date:  2013-09-15       Impact factor: 3.857

3.  Genome-wide association study of recalcitrant atopic dermatitis in Korean children.

Authors:  Kyung Won Kim; Rachel A Myers; Ji Hyun Lee; Catherine Igartua; Kyung Eun Lee; Yoon Hee Kim; Eun-Jin Kim; Dankyu Yoon; Joo-Shil Lee; Tomomitsu Hirota; Mayumi Tamari; Atsushi Takahashi; Michiaki Kubo; Je-Min Choi; Kyu-Earn Kim; Dan L Nicolae; Carole Ober; Myung Hyun Sohn
Journal:  J Allergy Clin Immunol       Date:  2015-04-30       Impact factor: 10.793

4.  [Genetics of atopic eczema. An update].

Authors:  E Rodríguez; S Weidinger
Journal:  Hautarzt       Date:  2015-02       Impact factor: 0.751

5.  The role of ST2 and ST2 genetic variants in schistosomiasis.

Authors:  Xin Long; Michelle Daya; Jianping Zhao; Nicholas Rafaels; Huifang Liang; Joseph Potee; Monica Campbell; Bixiang Zhang; Maria Ilma Araujo; Ricardo R Oliveira; Rasika A Mathias; Li Gao; Ingo Ruczinski; Steve N Georas; Donata Vercelli; Terri H Beaty; Kathleen C Barnes; Xiaoping Chen; Qian Chen
Journal:  J Allergy Clin Immunol       Date:  2017-02-09       Impact factor: 10.793

6.  Identification of two early life eczema and non-eczema phenotypes with high risk for asthma development.

Authors:  Elisabet Johansson; Jocelyn M Biagini Myers; Lisa J Martin; Hua He; Patrick Ryan; Grace K LeMasters; David I Bernstein; James Lockey; Gurjit K Khurana Hershey
Journal:  Clin Exp Allergy       Date:  2019-03-27       Impact factor: 5.018

Review 7.  The Genetics and Epigenetics of Atopic Dermatitis-Filaggrin and Other Polymorphisms.

Authors:  Yunsheng Liang; Christopher Chang; Qianjin Lu
Journal:  Clin Rev Allergy Immunol       Date:  2016-12       Impact factor: 8.667

8.  Genome-wide association study and admixture mapping reveal new loci associated with total IgE levels in Latinos.

Authors:  Maria Pino-Yanes; Christopher R Gignoux; Joshua M Galanter; Albert M Levin; Catarina D Campbell; Celeste Eng; Scott Huntsman; Katherine K Nishimura; Pierre-Antoine Gourraud; Kiana Mohajeri; Brian J O'Roak; Donglei Hu; Rasika A Mathias; Elizabeth A Nguyen; Lindsey A Roth; Badri Padhukasahasram; Andres Moreno-Estrada; Karla Sandoval; Cheryl A Winkler; Fred Lurmann; Adam Davis; Harold J Farber; Kelley Meade; Pedro C Avila; Denise Serebrisky; Rocio Chapela; Jean G Ford; Michael A Lenoir; Shannon M Thyne; Emerita Brigino-Buenaventura; Luisa N Borrell; William Rodriguez-Cintron; Saunak Sen; Rajesh Kumar; Jose R Rodriguez-Santana; Carlos D Bustamante; Fernando D Martinez; Benjamin A Raby; Scott T Weiss; Dan L Nicolae; Carole Ober; Deborah A Meyers; Eugene R Bleecker; Steven J Mack; Ryan D Hernandez; Evan E Eichler; Kathleen C Barnes; L Keoki Williams; Dara G Torgerson; Esteban G Burchard
Journal:  J Allergy Clin Immunol       Date:  2014-12-06       Impact factor: 10.793

9.  Mechanisms of vitamin D₃ metabolite repression of IgE-dependent mast cell activation.

Authors:  Kwok-Ho Yip; Natasha Kolesnikoff; Chunping Yu; Nicholas Hauschild; Houng Taing; Lisa Biggs; David Goltzman; Philip A Gregory; Paul H Anderson; Michael S Samuel; Stephen J Galli; Angel F Lopez; Michele A Grimbaldeston
Journal:  J Allergy Clin Immunol       Date:  2014-01-22       Impact factor: 10.793

10.  From genetics to treatment of eosinophilic esophagitis.

Authors:  Antonella Cianferoni; Jonathan M Spergel
Journal:  Curr Opin Allergy Clin Immunol       Date:  2015-10
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.