Literature DB >> 23039695

Influence of cell-to-cell variability on spatial pattern formation.

B Greese1, K Wester, R Bensch, O Ronneberger, J Timmer, M Huulskamp, C Fleck.   

Abstract

Many spatial patterns in biology arise through differentiation of selected cells within a tissue, which is regulated by a genetic network. This is specified by its structure, parameterisation and the noise on its components and reactions. The latter, in particular, is not well examined because it is rather difficult to trace. The authors use suitable local mathematical measures based on the Voronoi diagram of experimentally determined positions of epidermal plant hairs (trichomes) to examine the variability or noise in pattern formation. Although trichome initiation is a highly regulated process, the authors show that the experimentally observed trichome pattern is substantially disturbed by cell-to-cell variations. Using computer simulations, they find that the rates concerning the availability of the protein complex that triggers trichome formation plays a significant role in noise-induced variations of the pattern. The focus on the effects of cell noise yields further insights into pattern formation of trichomes. The authors expect that similar strategies can contribute to the understanding of other differentiation processes by elucidating the role of naturally occurring fluctuations in the concentration of cellular components or their properties.

Mesh:

Year:  2012        PMID: 23039695     DOI: 10.1049/iet-syb.2011.0050

Source DB:  PubMed          Journal:  IET Syst Biol        ISSN: 1751-8849            Impact factor:   1.615


  6 in total

1.  Accounting for randomness in measurement and sampling in studying cancer cell population dynamics.

Authors:  Siavash Ghavami; Olaf Wolkenhauer; Farshad Lahouti; Mukhtar Ullah; Michael Linnebacher
Journal:  IET Syst Biol       Date:  2014-10       Impact factor: 1.615

2.  Models to reconcile plant science and stochasticity.

Authors:  Sam Collaudin; Vincent Mirabet
Journal:  Front Plant Sci       Date:  2014-11-14       Impact factor: 5.753

Review 3.  Quantification of variability in trichome patterns.

Authors:  Bettina Greese; Martin Hülskamp; Christian Fleck
Journal:  Front Plant Sci       Date:  2014-11-13       Impact factor: 5.753

Review 4.  The organelle of differentiation in embryos: the cell state splitter.

Authors:  Natalie K Gordon; Richard Gordon
Journal:  Theor Biol Med Model       Date:  2016-03-10       Impact factor: 2.432

5.  Semi-automated 3D leaf reconstruction and analysis of trichome patterning from light microscopic images.

Authors:  Henrik Failmezger; Benjamin Jaegle; Andrea Schrader; Martin Hülskamp; Achim Tresch
Journal:  PLoS Comput Biol       Date:  2013-04-18       Impact factor: 4.475

6.  Effects of bursty protein production on the noisy oscillatory properties of downstream pathways.

Authors:  D L K Toner; R Grima
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

  6 in total

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