Literature DB >> 23034236

Tailoring enzymes acting on carrier protein-tethered substrates in natural product biosynthesis.

Shuangjun Lin1, Tingting Huang, Ben Shen.   

Abstract

Carrier proteins (CPs) are integral components of fatty acid synthases, polyketide synthases, and nonribosomal peptide synthetases and play critical roles in the biosynthesis of fatty acids, polyketides, and nonribosomal peptides. An emerging role CPs play in natural product biosynthesis involves tailoring enzymes that act on CP-tethered substrates. These enzymes provide a new opportunity to engineer natural product diversity by exploiting CPs to increase substrate promiscuity for the tailoring steps. This chapter describes protocols for in vitro biochemical characterization of SgcC3 and SgcC that catalyze chlorination and hydroxylation of SgcC2-tethered (S)-β-tyrosine and analogues in the biosynthesis of the enediyne chromophore of the chromoprotein C-1027. These protocols are applicable to mechanistic characterization and engineered exploitation of other tailoring enzymes that act on CP-tethered substrates in natural product biosynthesis and structural diversification. The ultimate goal is to use the in vitro findings to guide in vivo engineering of designer natural products.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23034236     DOI: 10.1016/B978-0-12-394291-3.00008-3

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  9 in total

1.  Characterization of Acyl Carrier Protein-Dependent Glycosyltransferase in Mitomycin C Biosynthesis.

Authors:  Hai P Nguyen; Kenichi Yokoyama
Journal:  Biochemistry       Date:  2019-06-12       Impact factor: 3.162

2.  Biochemical determination of enzyme-bound metabolites: preferential accumulation of a programmed octaketide on the enediyne polyketide synthase CalE8.

Authors:  Katherine Belecki; Craig A Townsend
Journal:  J Am Chem Soc       Date:  2013-09-17       Impact factor: 15.419

3.  Cloning and sequencing of the kedarcidin biosynthetic gene cluster from Streptoalloteichus sp. ATCC 53650 revealing new insights into biosynthesis of the enediyne family of antitumor antibiotics.

Authors:  Jeremy R Lohman; Sheng-Xiong Huang; Geoffrey P Horsman; Paul E Dilfer; Tingting Huang; Yihua Chen; Evelyn Wendt-Pienkowski; Ben Shen
Journal:  Mol Biosyst       Date:  2013-01-29

4.  A new member of the 4-methylideneimidazole-5-one-containing aminomutase family from the enediyne kedarcidin biosynthetic pathway.

Authors:  Sheng-Xiong Huang; Jeremy R Lohman; Tingting Huang; Ben Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-30       Impact factor: 11.205

5.  Identification and characterization of the biosynthetic gene cluster of polyoxypeptin A, a potent apoptosis inducer.

Authors:  Yanhua Du; Yemin Wang; Tingting Huang; Meifeng Tao; Zixin Deng; Shuangjun Lin
Journal:  BMC Microbiol       Date:  2014-02-08       Impact factor: 3.605

Review 6.  Expanding beyond canonical metabolism: Interfacing alternative elements, synthetic biology, and metabolic engineering.

Authors:  Kevin B Reed; Hal S Alper
Journal:  Synth Syst Biotechnol       Date:  2017-12-19

7.  Crystal Structures of SgcE6 and SgcC, the Two-Component Monooxygenase That Catalyzes Hydroxylation of a Carrier Protein-Tethered Substrate during the Biosynthesis of the Enediyne Antitumor Antibiotic C-1027 in Streptomyces globisporus.

Authors:  Chin-Yuan Chang; Jeremy R Lohman; Hongnan Cao; Kemin Tan; Jeffrey D Rudolf; Ming Ma; Weijun Xu; Craig A Bingman; Ragothaman M Yennamalli; Lance Bigelow; Gyorgy Babnigg; Xiaohui Yan; Andrzej Joachimiak; George N Phillips; Ben Shen
Journal:  Biochemistry       Date:  2016-09-01       Impact factor: 3.162

Review 8.  Generate a bioactive natural product library by mining bacterial cytochrome P450 patterns.

Authors:  Xiangyang Liu
Journal:  Synth Syst Biotechnol       Date:  2016-02-26

Review 9.  Two-Component FAD-Dependent Monooxygenases: Current Knowledge and Biotechnological Opportunities.

Authors:  Thomas Heine; Willem J H van Berkel; George Gassner; Karl-Heinz van Pée; Dirk Tischler
Journal:  Biology (Basel)       Date:  2018-08-02
  9 in total

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