Literature DB >> 23032187

Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-κB regulation.

Fuminori Tokunaga1, Hiroshi Nishimasu, Ryuichiro Ishitani, Eiji Goto, Takuya Noguchi, Kazuhiro Mio, Kiyoko Kamei, Averil Ma, Kazuhiro Iwai, Osamu Nureki.   

Abstract

LUBAC (linear ubiquitin chain assembly complex) activates the canonical NF-κB pathway through linear polyubiquitination of NEMO (NF-κB essential modulator, also known as IKKγ) and RIP1. However, the regulatory mechanism of LUBAC-mediated NF-κB activation remains elusive. Here, we show that A20 suppresses LUBAC-mediated NF-κB activation by binding linear polyubiquitin via the C-terminal seventh zinc finger (ZF7), whereas CYLD suppresses it through deubiquitinase (DUB) activity. We determined the crystal structures of A20 ZF7 in complex with linear diubiquitin at 1.70-1.98 Å resolutions. The crystal structures revealed that A20 ZF7 simultaneously recognizes the Met1-linked proximal and distal ubiquitins, and that genetic mutations associated with B cell lymphomas map to the ubiquitin-binding sites. Our functional analysis indicated that the binding of A20 ZF7 to linear polyubiquitin contributes to the recruitment of A20 into a TNF receptor (TNFR) signalling complex containing LUBAC and IκB kinase (IKK), which results in NF-κB suppression. These findings provide new insight into the regulation of immune and inflammatory responses.

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Year:  2012        PMID: 23032187      PMCID: PMC3463848          DOI: 10.1038/emboj.2012.241

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  63 in total

Review 1.  LUBAC, a novel ubiquitin ligase for linear ubiquitination, is crucial for inflammation and immune responses.

Authors:  Fuminori Tokunaga; Kazuhiro Iwai
Journal:  Microbes Infect       Date:  2012-01-25       Impact factor: 2.700

Review 2.  NF-κB, the first quarter-century: remarkable progress and outstanding questions.

Authors:  Matthew S Hayden; Sankar Ghosh
Journal:  Genes Dev       Date:  2012-02-01       Impact factor: 11.361

3.  Lys11-linked ubiquitin chains adopt compact conformations and are preferentially hydrolyzed by the deubiquitinase Cezanne.

Authors:  Anja Bremm; Stefan M V Freund; David Komander
Journal:  Nat Struct Mol Biol       Date:  2010-07-11       Impact factor: 15.369

Review 4.  Expression, biological activities and mechanisms of action of A20 (TNFAIP3).

Authors:  Lynn Verstrepen; Kelly Verhelst; Geert van Loo; Isabelle Carpentier; Steven C Ley; Rudi Beyaert
Journal:  Biochem Pharmacol       Date:  2010-07-03       Impact factor: 5.858

Review 5.  A20: from ubiquitin editing to tumour suppression.

Authors:  Sarah G Hymowitz; Ingrid E Wertz
Journal:  Nat Rev Cancer       Date:  2010-04-12       Impact factor: 60.716

Review 6.  Ubiquitination in signaling to and activation of IKK.

Authors:  Zhijian J Chen
Journal:  Immunol Rev       Date:  2012-03       Impact factor: 12.988

7.  The ubiquitin ligase XIAP recruits LUBAC for NOD2 signaling in inflammation and innate immunity.

Authors:  Rune Busk Damgaard; Ueli Nachbur; Monica Yabal; Wendy Wei-Lynn Wong; Berthe Katrine Fiil; Mischa Kastirr; Eva Rieser; James Arthur Rickard; Aleksandra Bankovacki; Christian Peschel; Juergen Ruland; Simon Bekker-Jensen; Niels Mailand; Thomas Kaufmann; Andreas Strasser; Henning Walczak; John Silke; Philipp J Jost; Mads Gyrd-Hansen
Journal:  Mol Cell       Date:  2012-05-17       Impact factor: 17.970

8.  Analysis of nuclear factor-κB (NF-κB) essential modulator (NEMO) binding to linear and lysine-linked ubiquitin chains and its role in the activation of NF-κB.

Authors:  Tobias Kensche; Fuminori Tokunaga; Fumiyo Ikeda; Eiji Goto; Kazuhiro Iwai; Ivan Dikic
Journal:  J Biol Chem       Date:  2012-05-17       Impact factor: 5.157

Review 9.  Diverse ubiquitin signaling in NF-κB activation.

Authors:  Kazuhiro Iwai
Journal:  Trends Cell Biol       Date:  2012-04-28       Impact factor: 20.808

10.  Structural basis for recognition of diubiquitins by NEMO.

Authors:  Yu-Chih Lo; Su-Chang Lin; Carla C Rospigliosi; Dietrich B Conze; Chuan-Jin Wu; Jonathan D Ashwell; David Eliezer; Hao Wu
Journal:  Mol Cell       Date:  2009-01-29       Impact factor: 17.970

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  97 in total

1.  A20 targets caspase-8 and FADD to protect HTLV-I-infected cells.

Authors:  Y Saitoh; A Hamano; K Mochida; A Kakeya; M Uno; E Tsuruyama; H Ichikawa; F Tokunaga; A Utsunomiya; T Watanabe; S Yamaoka
Journal:  Leukemia       Date:  2015-10-06       Impact factor: 11.528

2.  A20 suppresses vascular inflammation by recruiting proinflammatory signaling molecules to intracellular aggresomes.

Authors:  Karine Enesa; Herwig P Moll; Le Luong; Christiane Ferran; Paul C Evans
Journal:  FASEB J       Date:  2015-02-09       Impact factor: 5.191

3.  The E3 ubiquitin ligase MIB2 enhances inflammation by degrading the deubiquitinating enzyme CYLD.

Authors:  Atsushi Uematsu; Kohki Kido; Hirotaka Takahashi; Chikako Takahashi; Yuta Yanagihara; Noritaka Saeki; Shuhei Yoshida; Masashi Maekawa; Mamoru Honda; Tsutomu Kai; Kouhei Shimizu; Shigeki Higashiyama; Yuuki Imai; Fuminori Tokunaga; Tatsuya Sawasaki
Journal:  J Biol Chem       Date:  2019-07-31       Impact factor: 5.157

Review 4.  TNF biology, pathogenic mechanisms and emerging therapeutic strategies.

Authors:  George D Kalliolias; Lionel B Ivashkiv
Journal:  Nat Rev Rheumatol       Date:  2015-12-10       Impact factor: 20.543

5.  Structures of CYLD USP with Met1- or Lys63-linked diubiquitin reveal mechanisms for dual specificity.

Authors:  Yusuke Sato; Eiji Goto; Yuri Shibata; Yuji Kubota; Atsushi Yamagata; Sakurako Goto-Ito; Keiko Kubota; Jun-ichiro Inoue; Mutsuhiro Takekawa; Fuminori Tokunaga; Shuya Fukai
Journal:  Nat Struct Mol Biol       Date:  2015-02-16       Impact factor: 15.369

Review 6.  Diverse ubiquitin linkages regulate RIP kinases-mediated inflammatory and cell death signaling.

Authors:  Axel Witt; Domagoj Vucic
Journal:  Cell Death Differ       Date:  2017-05-05       Impact factor: 15.828

Review 7.  An Update on Autoinflammatory Diseases: Relopathies.

Authors:  Annemarie Steiner; Cassandra R Harapas; Seth L Masters; Sophia Davidson
Journal:  Curr Rheumatol Rep       Date:  2018-05-30       Impact factor: 4.592

Review 8.  Regulation of nuclear factor-κB in autoimmunity.

Authors:  Shao-Cong Sun; Jae-Hoon Chang; Jin Jin
Journal:  Trends Immunol       Date:  2013-02-20       Impact factor: 16.687

Review 9.  Regulation of NF-κB by TNF family cytokines.

Authors:  Matthew S Hayden; Sankar Ghosh
Journal:  Semin Immunol       Date:  2014-06-21       Impact factor: 11.130

Review 10.  Linear ubiquitin chains: NF-κB signalling, cell death and beyond.

Authors:  Kazuhiro Iwai; Hiroaki Fujita; Yoshiteru Sasaki
Journal:  Nat Rev Mol Cell Biol       Date:  2014-07-09       Impact factor: 94.444

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