Literature DB >> 23030936

Universal properties of knotted polymer rings.

M Baiesi1, E Orlandini.   

Abstract

By performing Monte Carlo sampling of N-steps self-avoiding polygons embedded on different Bravais lattices we explore the robustness of universality in the entropic, metric, and geometrical properties of knotted polymer rings. In particular, by simulating polygons with N up to 10(5) we furnish a sharp estimate of the asymptotic values of the knot probability ratios and show their independence on the lattice type. This universal feature was previously suggested, although with different estimates of the asymptotic values. In addition, we show that the scaling behavior of the mean-squared radius of gyration of polygons depends on their knot type only through its correction to scaling. Finally, as a measure of the geometrical self-entanglement of the self-avoiding polygons we consider the standard deviation of the writhe distribution and estimate its power-law behavior in the large N limit. The estimates of the power exponent do depend neither on the lattice nor on the knot type, strongly supporting an extension of the universality property to some features of the geometrical entanglement.

Entities:  

Year:  2012        PMID: 23030936     DOI: 10.1103/PhysRevE.86.031805

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  3 in total

1.  Free-energy calculations for semi-flexible macromolecules: applications to DNA knotting and looping.

Authors:  Stefan M Giovan; Robert G Scharein; Andreas Hanke; Stephen D Levene
Journal:  J Chem Phys       Date:  2014-11-07       Impact factor: 3.488

2.  Conformation of ring single-stranded DNA measured by DNA origami structures.

Authors:  Efrat Roth Weizman; Alex Glick Azaria; Yuval Garini
Journal:  Biophys J       Date:  2022-04-30       Impact factor: 3.699

3.  Size distribution of ring polymers.

Authors:  Shlomi Medalion; Erez Aghion; Hagai Meirovitch; Eli Barkai; David A Kessler
Journal:  Sci Rep       Date:  2016-06-15       Impact factor: 4.379

  3 in total

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