Literature DB >> 23021372

Evaluating a new marker for risk prediction: decision analysis to the rescue.

Stuart G Baker1, Barnett S Kramer.   

Abstract

In many areas of medicine risk prediction models are used to identify high-risk persons to receive treatment, with the goal of maximizing the ratio of benefits to harms. Thus there is considerable interest in evaluating markers to improve risk prediction. Many measures to evaluate a new marker for risk prediction are based solely on predictive accuracy including the odds ratio, change in the area under the receiver operating characteristic curve, and net reclassification improvement. However, predictive accuracy measures do not capture important clinical implications. Decision analysis comes to the rescue by including the ratio of the anticipated harm ("cost") of a false positive to the anticipated benefit of a true positive, which is transformed into a risk threshold (T) of indifference between treatment and no treatment. A decision-analytic measure of the "value" of a new marker is the number needed to test at a particular risk threshold, denoted NNTest(T), the minimum number of marker tests per true positive needed for risk prediction to be worthwhile. If NNTest(T) is acceptable given the invasiveness and adverse consequences of the test for the new marker, the new marker is recommended for inclusion in risk prediction. We provide a simple review of the derivation and computation of NNTest(T) from risk stratification tables and compare the minimum of NNTest(T), over risk thresholds, with measures of predictive accuracy in six studies. The results illustrate the advantages of this decision-analytic approach for evaluating a new marker for risk prediction.

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Year:  2012        PMID: 23021372

Source DB:  PubMed          Journal:  Discov Med        ISSN: 1539-6509            Impact factor:   2.970


  6 in total

Review 1.  Suitable trial designs and cohorts for preventive breast cancer agents.

Authors:  Kathrin Strasser-Weippl; Paul E Goss
Journal:  Nat Rev Clin Oncol       Date:  2013-10-08       Impact factor: 66.675

2.  Assessment of diagnostic capacity and decision-making based on the 2015 American Thyroid Association ultrasound classification system.

Authors:  Luis-Mauricio Hurtado-Lopez; Alfredo Carrillo-Muñoz; Felipe-Rafael Zaldivar-Ramirez; Erich Otto Paul Basurto-Kuba; Blanca-Estela Monroy-Lozano
Journal:  World J Methodol       Date:  2022-05-20

3.  Comparing diagnostic tests on benefit-risk.

Authors:  Gene Pennello; Norberto Pantoja-Galicia; Scott Evans
Journal:  J Biopharm Stat       Date:  2016-08-22       Impact factor: 1.051

4.  How to interpret a small increase in AUC with an additional risk prediction marker: decision analysis comes through.

Authors:  Stuart G Baker; Ewoud Schuit; Ewout W Steyerberg; Michael J Pencina; Andrew Vickers; Andew Vickers; Karel G M Moons; Ben W J Mol; Karen S Lindeman
Journal:  Stat Med       Date:  2014-05-13       Impact factor: 2.373

5.  The Predictive Approaches to Treatment effect Heterogeneity (PATH) Statement: Explanation and Elaboration.

Authors:  David M Kent; David van Klaveren; Jessica K Paulus; Ralph D'Agostino; Steve Goodman; Rodney Hayward; John P A Ioannidis; Bray Patrick-Lake; Sally Morton; Michael Pencina; Gowri Raman; Joseph S Ross; Harry P Selker; Ravi Varadhan; Andrew Vickers; John B Wong; Ewout W Steyerberg
Journal:  Ann Intern Med       Date:  2019-11-12       Impact factor: 25.391

6.  Clinical and CT Radiomics Nomogram for Preoperative Differentiation of Pulmonary Adenocarcinoma From Tuberculoma in Solitary Solid Nodule.

Authors:  Yaoyao Zhuo; Yi Zhan; Zhiyong Zhang; Fei Shan; Jie Shen; Daoming Wang; Mingfeng Yu
Journal:  Front Oncol       Date:  2021-10-12       Impact factor: 6.244

  6 in total

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