Literature DB >> 23016915

Comprehensive molecular motion capture for sphingomyelin by site-specific deuterium labeling.

Nobuaki Matsumori1, Tomokazu Yasuda, Hiroki Okazaki, Takashi Suzuki, Toshiyuki Yamaguchi, Hiroshi Tsuchikawa, Mototsugu Doi, Tohru Oishi, Michio Murata.   

Abstract

Lipid rafts have attracted much attention because of their significant functional roles in membrane-associated processes. It is thought that sphingomyelin and cholesterol are essential for forming lipid rafts; however, their motion characteristics are not fully understood despite numerous studies. Here we show accurate local motions encompassing an entire sphingomyelin molecule, which were captured by measuring quadrupole splittings for 19 kinds of site-specifically deuterated sphingomyelins (that is, molecular motion capture of sphingomyelin). The quadrupole splitting profiles, which are distinct from those reported from perdeuterated sphingomyelins or simulation studies, reveal that cholesterol enhances the order in the middle parts of the alkyl chains more efficaciously than at the shallow positions. Comparison with dimyristoylphosphocholine bilayers suggests that cholesterol is deeper in sphingomyelin bilayers, which likely explains the so-called umbrella effect. The experiments also demonstrate that (i) the C2'-C3' bond predominantly takes the gauche conformation, (ii) the net ordering effect of cholesterol in sphingomyelin bilayers is not larger than that in phosphatidylcholine bilayers, (iii) cholesterol has no specific preference for the acyl or sphingosine chain, (iv) the acyl and sphingosine chains seem mismatched by about two methylene lengths, and (v) the motion of the upper regions of sphingomyelin chains is less temperature dependent than that of lower regions probably due to intermolecular hydrogen bond formation among SM molecules. These insights into the atomic-level dynamics of sphingomyelin provide critical clues to understanding the mechanism of raft formation.

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Year:  2012        PMID: 23016915     DOI: 10.1021/bi3009399

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  20 in total

1.  Impact of Acyl Chain Mismatch on the Formation and Properties of Sphingomyelin-Cholesterol Domains.

Authors:  Thomas K M Nyholm; Oskar Engberg; Victor Hautala; Hiroshi Tsuchikawa; Kai-Lan Lin; Michio Murata; J Peter Slotte
Journal:  Biophys J       Date:  2019-09-25       Impact factor: 4.033

Review 2.  Dynamic membrane interactions of antibacterial and antifungal biomolecules, and amyloid peptides, revealed by solid-state NMR spectroscopy.

Authors:  Akira Naito; Nobuaki Matsumori; Ayyalusamy Ramamoorthy
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-06-06       Impact factor: 3.770

3.  Bilayer Interactions among Unsaturated Phospholipids, Sterols, and Ceramide.

Authors:  J Peter Slotte; Tomokazu Yasuda; Oskar Engberg; Md Abdullah Al Sazzad; Victor Hautala; Thomas K M Nyholm; Michio Murata
Journal:  Biophys J       Date:  2017-04-25       Impact factor: 4.033

4.  Deuterium NMR of raft model membranes reveals domain-specific order profiles and compositional distribution.

Authors:  Tomokazu Yasuda; Hiroshi Tsuchikawa; Michio Murata; Nobuaki Matsumori
Journal:  Biophys J       Date:  2015-05-19       Impact factor: 4.033

5.  Detailed comparison of deuterium quadrupole profiles between sphingomyelin and phosphatidylcholine bilayers.

Authors:  Tomokazu Yasuda; Masanao Kinoshita; Michio Murata; Nobuaki Matsumori
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

6.  Sphingomyelin distribution in lipid rafts of artificial monolayer membranes visualized by Raman microscopy.

Authors:  Jun Ando; Masanao Kinoshita; Jin Cui; Hiroyuki Yamakoshi; Kosuke Dodo; Katsumasa Fujita; Michio Murata; Mikiko Sodeoka
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-30       Impact factor: 11.205

Review 7.  Cholesterol-induced suppression of membrane elastic fluctuations at the atomistic level.

Authors:  Trivikram R Molugu; Michael F Brown
Journal:  Chem Phys Lipids       Date:  2016-05-03       Impact factor: 3.329

8.  The Influence of Hydrogen Bonding on Sphingomyelin/Colipid Interactions in Bilayer Membranes.

Authors:  Tomokazu Yasuda; Md Abdullah Al Sazzad; Niklas Z Jäntti; Olli T Pentikäinen; J Peter Slotte
Journal:  Biophys J       Date:  2016-01-19       Impact factor: 4.033

9.  The Long-Chain Sphingoid Base of Ceramides Determines Their Propensity for Lateral Segregation.

Authors:  Md Abdullah Al Sazzad; Tomokazu Yasuda; Michio Murata; J Peter Slotte
Journal:  Biophys J       Date:  2017-03-14       Impact factor: 4.033

10.  Sphingomyelin Stereoisomers Reveal That Homophilic Interactions Cause Nanodomain Formation.

Authors:  Yo Yano; Shinya Hanashima; Tomokazu Yasuda; Hiroshi Tsuchikawa; Nobuaki Matsumori; Masanao Kinoshita; Md Abdullah Al Sazzad; J Peter Slotte; Michio Murata
Journal:  Biophys J       Date:  2018-09-07       Impact factor: 4.033

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