Literature DB >> 23015694

In vitro assembly of an empty picornavirus capsid follows a dodecahedral path.

Chenglei Li1, Joseph Che-Yen Wang, Milton W Taylor, Adam Zlotnick.   

Abstract

The Picornaviridae are a large family of small, spherical RNA viruses that includes numerous pathogens. The picornavirus structural proteins VP0, VP1, and VP3 are believed to first form protomers, which then form 14S particles and subsequently assemble to form empty and RNA-filled particles. 14S particles have long been presumed to be pentamers. However, the structure of the 14S particles, their mechanism of assembly, and the role of empty particles during infection are all unknown. We established an in vitro assembly system for bovine enterovirus (BEV) by using purified baculovirus-expressed proteins. By Rayleigh scattering, we determined that 14S particles are 488 kDa, confirming they are pentamers. Image reconstructions based on negative-stain electron microscopy showed that 14S particles have 5-fold symmetry, and their structures correlate extremely well with the corresponding pentamer from crystal structures of mature BEV. Purified 14S particles readily assemble in response to increasing ionic strength or temperature to form 5.8-MDa 12-pentamer particles, indistinguishable from native empty particles. Surprisingly, empty particles were sufficiently stable that, under physiological conditions, dissociation is unlikely to be a biologically relevant reaction. This suggests that empty particles are not a storage form of 14S particles, at least for bovine enterovirus, but are either a dead-end product or direct precursor into which viral RNA is packaged by as-yet-unidentified machinery.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23015694      PMCID: PMC3497625          DOI: 10.1128/JVI.01033-12

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  44 in total

Review 1.  Exploring icosahedral virus structures with VIPER.

Authors:  Padmaja Natarajan; Gabriel C Lander; Craig M Shepherd; Vijay S Reddy; Charles L Brooks; John E Johnson
Journal:  Nat Rev Microbiol       Date:  2005-10       Impact factor: 60.633

2.  EMAN2: an extensible image processing suite for electron microscopy.

Authors:  Guang Tang; Liwei Peng; Philip R Baldwin; Deepinder S Mann; Wen Jiang; Ian Rees; Steven J Ludtke
Journal:  J Struct Biol       Date:  2006-06-08       Impact factor: 2.867

3.  Molecular-based reclassification of the bovine enteroviruses.

Authors:  Roland Zell; Andi Krumbholz; Malte Dauber; Elizabeth Hoey; Peter Wutzler
Journal:  J Gen Virol       Date:  2006-02       Impact factor: 3.891

4.  Catching a virus in the act of RNA release: a novel poliovirus uncoating intermediate characterized by cryo-electron microscopy.

Authors:  Hazel C Levy; Mihnea Bostina; David J Filman; James M Hogle
Journal:  J Virol       Date:  2010-02-24       Impact factor: 5.103

5.  The thermodynamics of virus capsid assembly.

Authors:  Sarah Katen; Adam Zlotnick
Journal:  Methods Enzymol       Date:  2009       Impact factor: 1.600

6.  A quantitative description of in vitro assembly of human papillomavirus 16 virus-like particles.

Authors:  Santanu Mukherjee; Marc V Thorsteinsson; Lauren Beth Johnston; Pete A DePhillips; Adam Zlotnick
Journal:  J Mol Biol       Date:  2008-06-05       Impact factor: 5.469

7.  Functional coupling between replication and packaging of poliovirus replicon RNA.

Authors:  C I Nugent; K L Johnson; P Sarnow; K Kirkegaard
Journal:  J Virol       Date:  1999-01       Impact factor: 5.103

8.  Antiviral agent blocks breathing of the common cold virus.

Authors:  J K Lewis; B Bothner; T J Smith; G Siuzdak
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

9.  Expression, purification and characterization of enterovirus-71 virus-like particles.

Authors:  Yao-Chi Chung; Jen-Huang Huang; Chia-Wei Lai; Heng-Chun Sheng; Shin-Ru Shih; Mei-Shang Ho; Yu-Chen Hu
Journal:  World J Gastroenterol       Date:  2006-02-14       Impact factor: 5.742

10.  VIPERdb2: an enhanced and web API enabled relational database for structural virology.

Authors:  Mauricio Carrillo-Tripp; Craig M Shepherd; Ian A Borelli; Sangita Venkataraman; Gabriel Lander; Padmaja Natarajan; John E Johnson; Charles L Brooks; Vijay S Reddy
Journal:  Nucleic Acids Res       Date:  2008-11-03       Impact factor: 16.971

View more
  25 in total

1.  Probing the biophysical interplay between a viral genome and its capsid.

Authors:  J Snijder; C Uetrecht; R J Rose; R Sanchez-Eugenia; G A Marti; J Agirre; D M A Guérin; G J L Wuite; A J R Heck; W H Roos
Journal:  Nat Chem       Date:  2013-04-28       Impact factor: 24.427

2.  Solving a Levinthal's paradox for virus assembly identifies a unique antiviral strategy.

Authors:  Eric C Dykeman; Peter G Stockley; Reidun Twarock
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-24       Impact factor: 11.205

3.  Honey Bee Deformed Wing Virus Structures Reveal that Conformational Changes Accompany Genome Release.

Authors:  Lindsey J Organtini; Kristin L Shingler; Robert E Ashley; Elizabeth A Capaldi; Kulsoom Durrani; Kelly A Dryden; Alexander M Makhov; James F Conway; Marie C Pizzorno; Susan Hafenstein
Journal:  J Virol       Date:  2017-01-03       Impact factor: 5.103

4.  Single Particle Observation of SV40 VP1 Polyanion-Induced Assembly Shows That Substrate Size and Structure Modulate Capsid Geometry.

Authors:  Chenglei Li; Andrew R Kneller; Stephen C Jacobson; Adam Zlotnick
Journal:  ACS Chem Biol       Date:  2017-03-30       Impact factor: 5.100

5.  The enterovirus 71 procapsid binds neutralizing antibodies and rescues virus infection in vitro.

Authors:  Kristin L Shingler; Javier O Cifuente; Robert E Ashley; Alexander M Makhov; James F Conway; Susan Hafenstein
Journal:  J Virol       Date:  2014-11-26       Impact factor: 5.103

6.  Transmission electron microscopy enables the reconstruction of the catenane and ring forms of CS2 hydrolase.

Authors:  Joseph Che-Yen Wang; Adam Zlotnick; Jasmin Mecinović
Journal:  Chem Commun (Camb)       Date:  2014-09-14       Impact factor: 6.222

7.  Structures of the procapsid and mature virion of enterovirus 71 strain 1095.

Authors:  Javier O Cifuente; Hyunwook Lee; Joshua D Yoder; Kristin L Shingler; Michael S Carnegie; Jennifer L Yoder; Robert E Ashley; Alexander M Makhov; James F Conway; Susan Hafenstein
Journal:  J Virol       Date:  2013-05-01       Impact factor: 5.103

Review 8.  Viral structural proteins as targets for antivirals.

Authors:  Christopher John Schlicksup; Adam Zlotnick
Journal:  Curr Opin Virol       Date:  2020-08-07       Impact factor: 7.090

9.  An Engineered Maturation Cleavage Provides a Recombinant Mimic of Foot-and-Mouth Disease Virus Capsid Assembly-Disassembly.

Authors:  Joseph Newman; David J Rowlands; Tobias J Tuthill
Journal:  Life (Basel)       Date:  2021-05-29

10.  An interaction between glutathione and the capsid is required for the morphogenesis of C-cluster enteroviruses.

Authors:  Hsin-Chieh Ma; Ying Liu; Chunling Wang; Michael Strauss; Nina Rehage; Ying-Han Chen; Nihal Altan-Bonnet; James Hogle; Eckard Wimmer; Steffen Mueller; Aniko V Paul; Ping Jiang
Journal:  PLoS Pathog       Date:  2014-04-10       Impact factor: 6.823

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.