Literature DB >> 23015218

Molecular mapping of vernalization requirement and fertility restoration genes in carrot.

María S Alessandro1, Claudio R Galmarini, Massimo Iorizzo, Philipp W Simon.   

Abstract

Carrot (Daucus carota L.) is a cool-season vegetable normally classified as a biennial species, requiring vernalization to induce flowering. Nevertheless, some cultivars adapted to warmer climates require less vernalization and can be classified as annual. Most modern carrot cultivars are hybrids which rely upon cytoplasmic male-sterility for commercial production. One major gene controlling floral initiation and several genes restoring male fertility have been reported but none have been mapped. The objective of the present work was to develop the first linkage map of carrot locating the genomic regions that control vernalization response and fertility restoration. Using an F(2) progeny, derived from the intercross between the annual cultivar 'Criolla INTA' and a petaloid male sterile biennial carrot evaluated over 2 years, both early flowering habit, which we name Vrn1, and restoration of petaloid cytoplasmic male sterility, which we name Rf1, were found to be dominant traits conditioned by single genes. On a map of 355 markers covering all 9 chromosomes with a total map length of 669 cM and an average marker-to-marker distance of 1.88 cM, Vrn1 mapped to chromosome 2 with flanking markers at 0.70 and 0.46 cM, and Rf1 mapped to chromosome 9 with flanking markers at 4.38 and 1.12 cM. These are the first two reproductive traits mapped in the carrot genome, and their map location and flanking markers provide valuable tools for studying traits important for carrot domestication and reproductive biology, as well as facilitating carrot breeding.

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Year:  2012        PMID: 23015218     DOI: 10.1007/s00122-012-1989-1

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  18 in total

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Authors:  León Patricio Martinez-Castilla; Elena R Alvarez-Buylla
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2.  Male Sterility in the Carrot.

Authors:  J E Welch; E L Grimball
Journal:  Science       Date:  1947-12-12       Impact factor: 47.728

3.  Evolutionary conservation of the FLOWERING LOCUS C-mediated vernalization response: evidence from the sugar beet (Beta vulgaris).

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Journal:  Genetics       Date:  2006-12-18       Impact factor: 4.562

4.  AFLP: a new technique for DNA fingerprinting.

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Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

5.  Comparative mapping of quantitative trait loci sculpting the curd of Brassica oleracea.

Authors:  T H Lan; A H Paterson
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6.  Comparative FISH mapping of Daucus species (Apiaceae family).

Authors:  Marina Iovene; Pablo F Cavagnaro; Douglas Senalik; C Robin Buell; Jiming Jiang; Philipp W Simon
Journal:  Chromosome Res       Date:  2011-05-06       Impact factor: 5.239

7.  Concomitant reiterative BAC walking and fine genetic mapping enable physical map development for the broad-spectrum late blight resistance region, RB.

Authors:  J M Bradeen; S K Naess; J Song; G T Haberlach; S M Wielgus; C R Buell; J Jiang; J P Helgeson
Journal:  Mol Genet Genomics       Date:  2003-06-25       Impact factor: 3.291

8.  Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.

Authors:  Pablo F Cavagnaro; Sang-Min Chung; Sylvie Manin; Mehtap Yildiz; Aamir Ali; Maria S Alessandro; Massimo Iorizzo; Douglas A Senalik; Philipp W Simon
Journal:  BMC Genomics       Date:  2011-08-01       Impact factor: 3.969

9.  De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity.

Authors:  Massimo Iorizzo; Douglas A Senalik; Dariusz Grzebelus; Megan Bowman; Pablo F Cavagnaro; Marta Matvienko; Hamid Ashrafi; Allen Van Deynze; Philipp W Simon
Journal:  BMC Genomics       Date:  2011-08-02       Impact factor: 3.969

10.  The wheat VRN2 gene is a flowering repressor down-regulated by vernalization.

Authors:  Liuling Yan; Artem Loukoianov; Ann Blechl; Gabriela Tranquilli; Wusirika Ramakrishna; Phillip SanMiguel; Jeffrey L Bennetzen; Viviana Echenique; Jorge Dubcovsky
Journal:  Science       Date:  2004-03-12       Impact factor: 47.728

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  14 in total

1.  The genome sequence of 'Kurodagosun', a major carrot variety in Japan and China, reveals insights into biological research and carrot breeding.

Authors:  Feng Wang; Guang-Long Wang; Xi-Lin Hou; Meng-Yao Li; Zhi-Sheng Xu; Ai-Sheng Xiong
Journal:  Mol Genet Genomics       Date:  2018-03-01       Impact factor: 3.291

2.  Carotenoid Presence Is Associated with the Or Gene in Domesticated Carrot.

Authors:  Shelby L Ellison; Claire H Luby; Keo E Corak; Kevin M Coe; Douglas Senalik; Massimo Iorizzo; Irwin L Goldman; Philipp W Simon; Julie C Dawson
Journal:  Genetics       Date:  2018-10-23       Impact factor: 4.562

3.  Expression and mapping of anthocyanin biosynthesis genes in carrot.

Authors:  Mehtap Yildiz; David K Willis; Pablo F Cavagnaro; Massimo Iorizzo; Kazim Abak; Philipp W Simon
Journal:  Theor Appl Genet       Date:  2013-03-24       Impact factor: 5.699

4.  Mapping genes governing flower architecture and pollen development in a double mutant population of carrot.

Authors:  Holger Budahn; Rafał Barański; Dariusz Grzebelus; Agnieszka Kiełkowska; Petra Straka; Kai Metge; Bettina Linke; Thomas Nothnagel
Journal:  Front Plant Sci       Date:  2014-10-08       Impact factor: 5.753

5.  A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.

Authors:  Pablo F Cavagnaro; Massimo Iorizzo; Mehtap Yildiz; Douglas Senalik; Joshua Parsons; Shelby Ellison; Philipp W Simon
Journal:  BMC Genomics       Date:  2014-12-16       Impact factor: 3.969

6.  Identification and Characterization of DcUSAGT1, a UDP-Glucose: Sinapic Acid Glucosyltransferase from Purple Carrot Taproots.

Authors:  Yi-Yun Chen; Zhi-Sheng Xu; Ai-Sheng Xiong
Journal:  PLoS One       Date:  2016-05-12       Impact factor: 3.240

7.  Characterization of a Genomic Region under Selection in Cultivated Carrot (Daucus carota subsp. sativus) Reveals a Candidate Domestication Gene.

Authors:  Alicja Macko-Podgórni; Gabriela Machaj; Katarzyna Stelmach; Douglas Senalik; Ewa Grzebelus; Massimo Iorizzo; Philipp W Simon; Dariusz Grzebelus
Journal:  Front Plant Sci       Date:  2017-01-18       Impact factor: 5.753

8.  Adaptation to seasonality and the winter freeze.

Authors:  Jill C Preston; Simen R Sandve
Journal:  Front Plant Sci       Date:  2013-06-03       Impact factor: 5.753

9.  Diversity, genetic mapping, and signatures of domestication in the carrot (Daucus carota L.) genome, as revealed by Diversity Arrays Technology (DArT) markers.

Authors:  Dariusz Grzebelus; Massimo Iorizzo; Douglas Senalik; Shelby Ellison; Pablo Cavagnaro; Alicja Macko-Podgorni; Kasia Heller-Uszynska; Andrzej Kilian; Thomas Nothnagel; Charlotte Allender; Philipp W Simon; Rafal Baranski
Journal:  Mol Breed       Date:  2013-10-26       Impact factor: 2.589

10.  Characterization of centromeric histone H3 (CENH3) variants in cultivated and wild carrots (Daucus sp.).

Authors:  Frank Dunemann; Otto Schrader; Holger Budahn; Andreas Houben
Journal:  PLoS One       Date:  2014-06-02       Impact factor: 3.240

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