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Literature DB >> 23014960

Ratio-based decisions and the quantitative analysis of cDNA microarray images.

Y Chen, E R Dougherty, M L Bittner.

Abstract

Year: 1997 PMID： 23014960 DOI： 10.1117/12.281504

Source DB: PubMed Journal: J Biomed Opt ISSN： 1083-3668 Impact factor: 3.170

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123 in total

Review 1. The complexity of radiation stress responses: analysis by informatics and functional genomics approaches.

Authors: A J Fornace; S A Amundson; M Bittner; T G Myers; P Meltzer; J N Weinsten; J Trent
Journal: Gene Expr Date: 1999

2. Informatic selection of a neural crest-melanocyte cDNA set for microarray analysis.

Authors: S K Loftus; Y Chen; G Gooden; J F Ryan; G Birznieks; M Hilliard; A D Baxevanis; M Bittner; P Meltzer; J Trent; W Pavan
Journal: Proc Natl Acad Sci U S A Date: 1999-08-03 Impact factor: 11.205

3. Quantitative quality control in microarray image processing and data acquisition.

Authors: X Wang; S Ghosh; S W Guo
Journal: Nucleic Acids Res Date: 2001-08-01 Impact factor: 16.971

4. Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects.

Authors: G C Tseng; M K Oh; L Rohlin; J C Liao; W H Wong
Journal: Nucleic Acids Res Date: 2001-06-15 Impact factor: 16.971

Review 5. Microarray data quality analysis: lessons from the AFGC project. Arabidopsis Functional Genomics Consortium.

Authors: David Finkelstein; Rob Ewing; Jeremy Gollub; Fredrik Sterky; J Michael Cherry; Shauna Somerville
Journal: Plant Mol Biol Date: 2002-01 Impact factor: 4.076

6. Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation.

Authors: Yee Hwa Yang; Sandrine Dudoit; Percy Luu; David M Lin; Vivian Peng; John Ngai; Terence P Speed
Journal: Nucleic Acids Res Date: 2002-02-15 Impact factor: 16.971

Ratio-based decisions and the quantitative analysis of cDNA microarray images.

Review 1. The complexity of radiation stress responses: analysis by informatics and functional genomics approaches.

2. Informatic selection of a neural crest-melanocyte cDNA set for microarray analysis.

3. Quantitative quality control in microarray image processing and data acquisition.

4. Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects.

Review 5. Microarray data quality analysis: lessons from the AFGC project. Arabidopsis Functional Genomics Consortium.

6. Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation.

7. Image metrics in the statistical analysis of DNA microarray data.

8. Testing for differentially expressed genes with microarray data.

9. Matters of the heart transcriptome: a brief history of cardiovascular genomics.

10. Database of mRNA gene expression profiles of multiple human organs.