Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Genome sequence of a nicotine-degrading strain of Arthrobacter.

Literature DB >> 23012289

Genome sequence of a nicotine-degrading strain of Arthrobacter.

Yuxiang Yao¹, Hongzhi Tang, Huixue Ren, Hao Yu, Lijuan Wang, Ping Xu.

Abstract

We announce a 4.63-Mb genome assembly of an isolated bacterium that is the first sequenced nicotine-degrading Arthrobacter strain. Nicotine catabolism genes of the nicotine-degrading plasmid pAO1 were predicted, but plasmid function genes were not found. These results will help to better illustrate the molecular mechanism of nicotine degradation by Arthrobacter.

Entities: Chemical Gene

Mesh：

Substances：
DNA, Bacterial
Nicotine

Year: 2012 PMID： 23012289 PMCID： PMC3458684 DOI： 10.1128/JB.01370-12

Source DB: PubMed Journal: J Bacteriol ISSN： 0021-9193 Impact factor: 3.490

12 in total

1. KEGG: kyoto encyclopedia of genes and genomes.

Authors: M Kanehisa; S Goto
Journal: Nucleic Acids Res Date: 2000-01-01 Impact factor: 16.971

Review 2. Microbiology and biochemistry of nicotine degradation.

Authors: Roderich Brandsch
Journal: Appl Microbiol Biotechnol Date: 2005-12-07 Impact factor: 4.813

3. Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors: Daniel R Zerbino; Ewan Birney
Journal: Genome Res Date: 2008-03-18 Impact factor: 9.043

Review 4. Consumption and production waste: another externality of tobacco use.

Authors: T E Novotny; F Zhao
Journal: Tob Control Date: 1999 Impact factor: 7.552

5. Sequence of the 165-kilobase catabolic plasmid pAO1 from Arthrobacter nicotinovorans and identification of a pAO1-dependent nicotine uptake system.

Authors: Gabor L Igloi; Roderich Brandsch
Journal: J Bacteriol Date: 2003-03 Impact factor: 3.490

6. Novel nicotine oxidoreductase-encoding gene involved in nicotine degradation by Pseudomonas putida strain S16.

Authors: Hongzhi Tang; Lijuan Wang; Xiangzhou Meng; Lanying Ma; Shuning Wang; Xiaofei He; Geng Wu; Ping Xu
Journal: Appl Environ Microbiol Date: 2008-12-05 Impact factor: 4.792

7. Genomic analysis of Pseudomonas putida: genes in a genome island are crucial for nicotine degradation.

Authors: Hongzhi Tang; Yuxiang Yao; Lijuan Wang; Hao Yu; Yiling Ren; Geng Wu; Ping Xu
Journal: Sci Rep Date: 2012-04-23 Impact factor: 4.379

8. Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1.

Authors: Emmanuel F Mongodin; Nir Shapir; Sean C Daugherty; Robert T DeBoy; Joanne B Emerson; Alla Shvartzbeyn; Diana Radune; Jessica Vamathevan; Florenta Riggs; Viktoria Grinberg; Hoda Khouri; Lawrence P Wackett; Karen E Nelson; Michael J Sadowsky
Journal: PLoS Genet Date: 2006-12 Impact factor: 5.917

9. NCBI Reference Sequences: current status, policy and new initiatives.

Authors: Kim D Pruitt; Tatiana Tatusova; William Klimke; Donna R Maglott
Journal: Nucleic Acids Res Date: 2008-10-16 Impact factor: 16.971

10. The RAST Server: rapid annotations using subsystems technology.

Authors: Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal: BMC Genomics Date: 2008-02-08 Impact factor: 3.969

5 in total

1. Comparative genome analysis reveals the molecular basis of nicotine degradation and survival capacities of Arthrobacter.

Authors: Yuxiang Yao; Hongzhi Tang; Fei Su; Ping Xu
Journal: Sci Rep Date: 2015-02-27 Impact factor: 4.379

2. Characterization of a Novel Nicotine Degradation Gene Cluster ndp in Sphingomonas melonis TY and Its Evolutionary Analysis.

Authors: Haixia Wang; Xiao-Yang Zhi; Jiguo Qiu; Longxiang Shi; Zhenmei Lu
Journal: Front Microbiol Date: 2017-03-09 Impact factor: 5.640