Literature DB >> 23012282

Genome sequences of Pseudomonas luteola XLDN4-9 and Pseudomonas stutzeri XLDN-R, two efficient carbazole-degrading strains.

Xiaorui Liu1, Zhonghui Gai, Fei Tao, Hao Yu, Hongzhi Tang, Ping Xu.   

Abstract

Pseudomonas luteola XLDN4-9 and Pseudomonas stutzeri XLDN-R are two efficient carbazole-degrading pseudomonad strains. Here we present 4.63- and 4.70-Mb assemblies of their genomes. Their annotated key genes for carbazole catabolism are similar, which may provide further insights into the molecular mechanism of carbazole degradation in Pseudomonas.

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Year:  2012        PMID： 23012282      PMCID： PMC3458655          DOI： 10.1128/JB.01296-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  14 in total

Review 1.  The causes of Pseudomonas diversity.

Authors:  A J Spiers; A Buckling; P B Rainey
Journal:  Microbiology       Date:  2000-10       Impact factor: 2.777

2.  Mutagenic profiles of carbazole in the male germ cells of Swiss albino mice.

Authors:  Anand M Jha; Mithilesh K Bharti
Journal:  Mutat Res       Date:  2002-03-20       Impact factor: 2.433

3.  Degradation of carbazole in the presence of non-aqueous phase liquids by Pseudomonas sp.

Authors:  L Li; P Xu; H D Blankespoor
Journal:  Biotechnol Lett       Date:  2004-04       Impact factor: 2.461

4.  Degradation of carbazole and its derivatives by a Pseudomonas sp.

Authors:  Li Li; Qinggang Li; Fuli Li; Quan Shi; Bo Yu; Fengrui Liu; Ping Xu
Journal:  Appl Microbiol Biotechnol       Date:  2006-08-09       Impact factor: 4.813

5.  Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10.

Authors:  H Nojiri; H Sekiguchi; K Maeda; M Urata; S Nakai; T Yoshida; H Habe; T Omori
Journal:  J Bacteriol       Date:  2001-06       Impact factor: 3.490

Review 6.  Microbial degradation of sulfur, nitrogen and oxygen heterocycles.

Authors:  Ping Xu; Bo Yu; Fu Li Li; Xiao Feng Cai; Cui Qing Ma
Journal:  Trends Microbiol       Date:  2006-07-24       Impact factor: 17.079

7.  Comparative genetic diversity of Pseudomonas stutzeri genomovars, clonal structure, and phylogeny of the species.

Authors:  Aina Maria Cladera; Antonio Bennasar; Maria Barceló; Jorge Lalucat; Elena García-Valdés
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

8.  Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501.

Authors:  Yongliang Yan; Jian Yang; Yuetan Dou; Ming Chen; Shuzhen Ping; Junping Peng; Wei Lu; Wei Zhang; Ziying Yao; Hongquan Li; Wei Liu; Sheng He; Lizhao Geng; Xiaobing Zhang; Fan Yang; Haiying Yu; Yuhua Zhan; Danhua Li; Zhanglin Lin; Yiping Wang; Claudine Elmerich; Min Lin; Qi Jin
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-21       Impact factor: 11.205

Review 9.  Microbial denitrogenation of fossil fuels.

Authors:  M J Benedik; P R Gibbs; R R Riddle; R C Willson
Journal:  Trends Biotechnol       Date:  1998-09       Impact factor: 19.536

10.  Carotenoids play a positive role in the degradation of heterocycles by Sphingobium yanoikuyae.

Authors:  Xiaorui Liu; Zhonghui Gai; Fei Tao; Hongzhi Tang; Ping Xu
Journal:  PLoS One       Date:  2012-06-20       Impact factor: 3.240
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  5 in total

1.  Decolorization and biodegradation of textile di-azo dye Acid Blue 113 by Pseudomonas stutzeri AK6.

Authors:  Anjali U Joshi; Ankit T Hinsu; Rohitkumar J Kotadiya; Jalpa K Rank; Kavan N Andharia; Ramesh K Kothari
Journal:  3 Biotech       Date:  2020-04-25       Impact factor: 2.406

2.  Pan-genome dynamics of Pseudomonas gene complements enriched across hexachlorocyclohexane dumpsite.

Authors:  Anukriti Sharma; Naseer Sangwan; Vivek Negi; Puneet Kohli; Jitendra Paul Khurana; Desiraju Lakshmi Narsimha Rao; Rup Lal
Journal:  BMC Genomics       Date:  2015-04-18       Impact factor: 3.969

3.  Draft Genome Sequence of the Toluene-Degrading Pseudomonas stutzeri Strain ST-9.

Authors:  Margarita Gomila; Antonio Busquets; Elena García-Valdés; Esti Michael; Rivka Cahan; Yeshayahu Nitzan; Jorge Lalucat
Journal:  Genome Announc       Date:  2015-06-04

4.  Draft Genome of the Nitrogen-Fixing Bacterium Pseudomonas stutzeri Strain KOS6 Isolated from Industrial Hydrocarbon Sludge.

Authors:  Tatiana V Grigoryeva; Aleksandr V Laikov; Rimma P Naumova; Aleksandr I Manolov; Andrey K Larin; Irina Y Karpova; Tatiana A Semashko; Dmitry G Alexeev; Elena S Kostryukova; Rudolf Müller; Vadim M Govorun
Journal:  Genome Announc       Date:  2013-01-31

5.  Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Pseudomonas stutzeri KF716 (NBRC 110668).

Authors:  Jun Hirose; Atsushi Yamazoe; Akira Hosoyama; Nobutada Kimura; Hikaru Suenaga; Takahito Watanabe; Hidehiko Fujihara; Taiki Futagami; Masatoshi Goto; Kensuke Furukawa
Journal:  Genome Announc       Date:  2015-10-22
  5 in total

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