Literature DB >> 23012277

Genome sequence of the plant pathogen Pseudomonas syringae pv. panici LMG 2367.

He Liu1, Hui Qiu, Wenjun Zhao, Zhouqi Cui, Muhammad Ibrahim, Gulei Jin, Bin Li, Bo Zhu, Guan Lin Xie.   

Abstract

Pseudomonas syringae pv. panici is a phytopathogenic bacterium causing brown stripe disease in economically important crops worldwide. Here, we announce the draft genome sequence of Pseudomonas syringae pv. panici LMG2367 to provide further valuable insights for comparison of the pathovars among species Pseudomonas syringae.

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Year:  2012        PMID： 23012277      PMCID： PMC3458687          DOI： 10.1128/JB.01267-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  6 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  Genome sequence of the rice-pathogenic bacterium Acidovorax avenae subsp. avenae RS-1.

Authors:  Guan-Lin Xie; Guo-Qing Zhang; He Liu; Miao-Miao Lou; Wen-Xiao Tian; Bin Li; Xue-Ping Zhou; Bo Zhu; Gu-Lei Jin
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  Microbial gene identification using interpolated Markov models.

Authors:  S L Salzberg; A L Delcher; S Kasif; O White
Journal:  Nucleic Acids Res       Date:  1998-01-15       Impact factor: 16.971

5.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

6.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  6 in total
  6 in total

1.  Comparative Genomics of Prunus-Associated Members of the Pseudomonas syringae Species Complex Reveals Traits Supporting Co-evolution and Host Adaptation.

Authors:  Michela Ruinelli; Jochen Blom; Theo H M Smits; Joël F Pothier
Journal:  Front Microbiol       Date:  2022-05-03       Impact factor: 6.064

2.  The conserved upstream region of lscB/C determines expression of different levansucrase genes in plant pathogen Pseudomonas syringae.

Authors:  Shaunak Khandekar; Abhishek Srivastava; Daniel Pletzer; Antje Stahl; Matthias S Ullrich
Journal:  BMC Microbiol       Date:  2014-03-27       Impact factor: 3.605

3.  Genomics-Based Exploration of Virulence Determinants and Host-Specific Adaptations of Pseudomonas syringae Strains Isolated from Grasses.

Authors:  Alexey Dudnik; Robert Dudler
Journal:  Pathogens       Date:  2014-01-28

Review 4.  Plant Growth-Promoting Bacteria as an Emerging Tool to Manage Bacterial Rice Pathogens.

Authors:  Mohamad Syazwan Ngalimat; Erneeza Mohd Hata; Dzarifah Zulperi; Siti Izera Ismail; Mohd Razi Ismail; Nur Ain Izzati Mohd Zainudin; Noor Baity Saidi; Mohd Termizi Yusof
Journal:  Microorganisms       Date:  2021-03-26

5.  Bacterial Lipodepsipeptides and Some of Their Derivatives and Cyclic Dipeptides as Potential Agents for Biocontrol of Pathogenic Bacteria and Fungi of Agrarian Plants.

Authors:  Stefany Castaldi; Alessio Cimmino; Marco Masi; Antonio Evidente
Journal:  J Agric Food Chem       Date:  2022-04-08       Impact factor: 5.895

6.  Comparative genomics reveals genes significantly associated with woody hosts in the plant pathogen Pseudomonas syringae.

Authors:  Reuben W Nowell; Bridget E Laue; Paul M Sharp; Sarah Green
Journal:  Mol Plant Pathol       Date:  2016-07-15       Impact factor: 5.663
  6 in total

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