Literature DB >> 23011877

Backbone ¹H, ¹³C and ¹⁵N resonance assignments of the α-helical membrane protein TM0026 from Thermotoga maritima.

Brett M Kroncke1, Linda Columbus.   

Abstract

Critical to the use of solution NMR to describe the structure and flexibility of membrane proteins is the thorough understanding of the degree of perturbation induced by the detergent or other membrane mimetic. To develop a deeper understanding of the interaction between membrane proteins and micelles or bicelles, we will investigate the differences in structure and flexibility of a model membrane protein TM0026 from Thermotoga maritima using solution NMR. A comparison of the structural differences between TM0026 solubilized in different detergent combinations will provide important insight into the degree of modulation of membrane proteins by detergent physical properties. Here we report the nearly complete backbone and Cβ resonance assignments of the two transmembrane helical model protein TM0026. These assignments are the first step to using TM0026 to elucidate the interaction between membrane proteins and membrane mimetics.

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Year:  2012        PMID: 23011877      PMCID: PMC3543498          DOI: 10.1007/s12104-012-9410-1

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  14 in total

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Journal:  J Biol Chem       Date:  2001-06-29       Impact factor: 5.157

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Journal:  Methods       Date:  2004-11       Impact factor: 3.608

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Authors:  Charles R Sanders; Frank Sönnichsen
Journal:  Magn Reson Chem       Date:  2006-07       Impact factor: 2.447

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Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

6.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

7.  Mixing and matching detergents for membrane protein NMR structure determination.

Authors:  Linda Columbus; Jan Lipfert; Kalyani Jambunathan; Daniel A Fox; Adelene Y L Sim; Sebastian Doniach; Scott A Lesley
Journal:  J Am Chem Soc       Date:  2009-06-03       Impact factor: 15.419

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Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

9.  Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline.

Authors:  Scott A Lesley; Peter Kuhn; Adam Godzik; Ashley M Deacon; Irimpan Mathews; Andreas Kreusch; Glen Spraggon; Heath E Klock; Daniel McMullan; Tanya Shin; Juli Vincent; Alyssa Robb; Linda S Brinen; Mitchell D Miller; Timothy M McPhillips; Mark A Miller; Daniel Scheibe; Jaume M Canaves; Chittibabu Guda; Lukasz Jaroszewski; Thomas L Selby; Marc-Andre Elsliger; John Wooley; Susan S Taylor; Keith O Hodgson; Ian A Wilson; Peter G Schultz; Raymond C Stevens
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-22       Impact factor: 11.205

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Authors:  Elisabeth P Carpenter; Konstantinos Beis; Alexander D Cameron; So Iwata
Journal:  Curr Opin Struct Biol       Date:  2008-08-11       Impact factor: 6.809

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  1 in total

1.  Mapping membrane protein backbone dynamics: a comparison of site-directed spin labeling with NMR 15N-relaxation measurements.

Authors:  Ryan H Lo; Brett M Kroncke; Tsega L Solomon; Linda Columbus
Journal:  Biophys J       Date:  2014-10-07       Impact factor: 4.033

  1 in total

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