Literature DB >> 23011775

Complete nucleotide sequence of a Chinese isolate of Grapevine leafroll-associated virus 3 reveals a 5' UTR of 802 nucleotides.

Fei Fei1, Mu-Di Lyu, Jie Li, Zai-Feng Fan, Yu-Qin Cheng.   

Abstract

Grapevine leafroll-associated virus 3 (GLRaV-3) is widely spread in China. Here we report, for the first time, the complete nucleotide sequence of the Chinese isolate (LN) of GLRaV-3. The 18,563-nt genomic RNA is the largest of the GLRaV-3 genomes reported to date, with a 5' untranslated region of 802 nt. Its sequence shares 87.99-98.15 % identity with those of previously reported isolates, and phylogenetic analysis suggested placing isolate LN in group 3, together with another fully sequenced isolate, PL-20.

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Year:  2012        PMID： 23011775     DOI： 10.1007/s11262-012-0823-9

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  7 in total

1.  Complete nucleotide sequence and genome organization of Grapevine leafroll-associated virus 3, type member of the genus Ampelovirus.

Authors:  Kai-Shu Ling; Hai-Ying Zhu; Dennis Gonsalves
Journal:  J Gen Virol       Date:  2004-07       Impact factor: 3.891

2.  Complete nucleotide sequence of a South African isolate of grapevine leafroll-associated virus 3 reveals a 5'UTR of 737 nucleotides.

Authors:  H J Maree; M-J Freeborough; J T Burger
Journal:  Arch Virol       Date:  2008-02-15       Impact factor: 2.574

3.  Three genetic grapevine leafroll-associated virus 3 variants identified from South African vineyards show high variability in their 5'UTR.

Authors:  A E C Jooste; H J Maree; D U Bellstedt; D E Goszczynski; G Pietersen; J T Burger
Journal:  Arch Virol       Date:  2010-09-10       Impact factor: 2.574

4.  Five phylogenetic groups identified in the coat protein gene of grapevine leafroll-associated virus 3 obtained from Portuguese grapevine varieties.

Authors:  Paulo Gouveia; Margarida Teixeira Santos; José Eduardo Eiras-Dias; Gustavo Nolasco
Journal:  Arch Virol       Date:  2010-12-12       Impact factor: 2.574

5.  Genetic variability and population structure of Grapevine leafroll-associated virus 3 isolates.

Authors:  Camilla Turturo; Pasquale Saldarelli; Dong Yafeng; Michele Digiaro; Angelantonio Minafra; Vito Savino; G P Martelli
Journal:  J Gen Virol       Date:  2005-01       Impact factor: 3.891

6.  Genetic diversity in the 3' terminal 4.7-kb region of grapevine leafroll-associated virus 3.

Authors:  Jinbo Wang; Abhineet M Sharma; Siobain Duffy; Rodrigo P P Almeida
Journal:  Phytopathology       Date:  2011-04       Impact factor: 4.025

7.  Genome analysis and detection of a Chilean isolate of Grapevine leafroll associated virus-3.

Authors:  Esteban A Engel; Cristobal Girardi; Paula F Escobar; Vania Arredondo; Calixto Domínguez; Tomás Pérez-Acle; Pablo D T Valenzuela
Journal:  Virus Genes       Date:  2008-05-23       Impact factor: 2.332
  7 in total
  1 in total

1.  Grapevine leafroll-associated virus 3.

Authors:  Hans J Maree; Rodrigo P P Almeida; Rachelle Bester; Kar Mun Chooi; Daniel Cohen; Valerian V Dolja; Marc F Fuchs; Deborah A Golino; Anna E C Jooste; Giovanni P Martelli; Rayapati A Naidu; Adib Rowhani; Pasquale Saldarelli; Johan T Burger
Journal:  Front Microbiol       Date:  2013-04-16       Impact factor: 5.640
  1 in total

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