Literature DB >> 23011223

Genomic landscape of liver cancer.

Zemin Zhang.   

Abstract

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Year:  2012        PMID： 23011223     DOI： 10.1038/ng.2412

Source DB:  PubMed          Journal:  Nat Genet        ISSN： 1061-4036            Impact factor:   38.330


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  13 in total

Review 1.  A decade of exploring the cancer epigenome - biological and translational implications.

Authors:  Stephen B Baylin; Peter A Jones
Journal:  Nat Rev Cancer       Date:  2011-09-23       Impact factor: 60.716

2.  The mutation spectrum revealed by paired genome sequences from a lung cancer patient.

Authors:  William Lee; Zhaoshi Jiang; Jinfeng Liu; Peter M Haverty; Yinghui Guan; Jeremy Stinson; Peng Yue; Yan Zhang; Krishna P Pant; Deepali Bhatt; Connie Ha; Stephanie Johnson; Michael I Kennemer; Sankar Mohan; Igor Nazarenko; Colin Watanabe; Andrew B Sparks; David S Shames; Robert Gentleman; Frederic J de Sauvage; Howard Stern; Ajay Pandita; Dennis G Ballinger; Radoje Drmanac; Zora Modrusan; Somasekar Seshagiri; Zemin Zhang
Journal:  Nature       Date:  2010-05-27       Impact factor: 49.962

Review 3.  Hepatocellular carcinoma pathogenesis: from genes to environment.

Authors:  Paraskevi A Farazi; Ronald A DePinho
Journal:  Nat Rev Cancer       Date:  2006-09       Impact factor: 60.716

4.  TP53 Mutational signature for aristolochic acid: an environmental carcinogen.

Authors:  Masaaki Moriya; Neda Slade; Branko Brdar; Zvonimir Medverec; Karla Tomic; Bojan Jelaković; Lin Wu; Sim Truong; Andrea Fernandes; Arthur P Grollman
Journal:  Int J Cancer       Date:  2011-06-09       Impact factor: 7.396

5.  The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients.

Authors:  Zhaoshi Jiang; Suchit Jhunjhunwala; Jinfeng Liu; Peter M Haverty; Michael I Kennemer; Yinghui Guan; William Lee; Paolo Carnevali; Jeremy Stinson; Stephanie Johnson; Jingyu Diao; Stacy Yeung; Adrian Jubb; Weilan Ye; Thomas D Wu; Sharookh B Kapadia; Frederic J de Sauvage; Robert C Gentleman; Howard M Stern; Somasekar Seshagiri; Krishna P Pant; Zora Modrusan; Dennis G Ballinger; Zemin Zhang
Journal:  Genome Res       Date:  2012-01-20       Impact factor: 9.043

6.  Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma.

Authors:  Wing-Kin Sung; Hancheng Zheng; Shuyu Li; Ronghua Chen; Xiao Liu; Yingrui Li; Nikki P Lee; Wah H Lee; Pramila N Ariyaratne; Chandana Tennakoon; Fabianus H Mulawadi; Kwong F Wong; Angela M Liu; Ronnie T Poon; Sheung Tat Fan; Kwong L Chan; Zhuolin Gong; Yujie Hu; Zhao Lin; Guan Wang; Qinghui Zhang; Thomas D Barber; Wen-Chi Chou; Amit Aggarwal; Ke Hao; Wei Zhou; Chunsheng Zhang; James Hardwick; Carolyn Buser; Jiangchun Xu; Zhengyan Kan; Hongyue Dai; Mao Mao; Christoph Reinhard; Jun Wang; John M Luk
Journal:  Nat Genet       Date:  2012-05-27       Impact factor: 38.330

Review 7.  Etheno-adduct-forming chemicals: from mutagenicity testing to tumor mutation spectra.

Authors:  A Barbin
Journal:  Mutat Res       Date:  2000-04       Impact factor: 2.433

8.  Integrated analysis of somatic mutations and focal copy-number changes identifies key genes and pathways in hepatocellular carcinoma.

Authors:  Cécile Guichard; Giuliana Amaddeo; Sandrine Imbeaud; Yannick Ladeiro; Laura Pelletier; Ichrafe Ben Maad; Julien Calderaro; Paulette Bioulac-Sage; Mélanie Letexier; Françoise Degos; Bruno Clément; Charles Balabaud; Eric Chevet; Alexis Laurent; Gabrielle Couchy; Eric Letouzé; Fabien Calvo; Jessica Zucman-Rossi
Journal:  Nat Genet       Date:  2012-05-06       Impact factor: 38.330

9.  Melanoma genome sequencing reveals frequent PREX2 mutations.

Authors:  Michael F Berger; Eran Hodis; Timothy P Heffernan; Yonathan Lissanu Deribe; Michael S Lawrence; Alexei Protopopov; Elena Ivanova; Ian R Watson; Elizabeth Nickerson; Papia Ghosh; Hailei Zhang; Rhamy Zeid; Xiaojia Ren; Kristian Cibulskis; Andrey Y Sivachenko; Nikhil Wagle; Antje Sucker; Carrie Sougnez; Robert Onofrio; Lauren Ambrogio; Daniel Auclair; Timothy Fennell; Scott L Carter; Yotam Drier; Petar Stojanov; Meredith A Singer; Douglas Voet; Rui Jing; Gordon Saksena; Jordi Barretina; Alex H Ramos; Trevor J Pugh; Nicolas Stransky; Melissa Parkin; Wendy Winckler; Scott Mahan; Kristin Ardlie; Jennifer Baldwin; Jennifer Wargo; Dirk Schadendorf; Matthew Meyerson; Stacey B Gabriel; Todd R Golub; Stephan N Wagner; Eric S Lander; Gad Getz; Lynda Chin; Levi A Garraway
Journal:  Nature       Date:  2012-05-09       Impact factor: 49.962

10.  A small-cell lung cancer genome with complex signatures of tobacco exposure.

Authors:  Erin D Pleasance; Philip J Stephens; Sarah O'Meara; David J McBride; Alison Meynert; David Jones; Meng-Lay Lin; David Beare; King Wai Lau; Chris Greenman; Ignacio Varela; Serena Nik-Zainal; Helen R Davies; Gonzalo R Ordoñez; Laura J Mudie; Calli Latimer; Sarah Edkins; Lucy Stebbings; Lina Chen; Mingming Jia; Catherine Leroy; John Marshall; Andrew Menzies; Adam Butler; Jon W Teague; Jonathon Mangion; Yongming A Sun; Stephen F McLaughlin; Heather E Peckham; Eric F Tsung; Gina L Costa; Clarence C Lee; John D Minna; Adi Gazdar; Ewan Birney; Michael D Rhodes; Kevin J McKernan; Michael R Stratton; P Andrew Futreal; Peter J Campbell
Journal:  Nature       Date:  2009-12-16       Impact factor: 49.962
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  18 in total

1.  A single non-synonymous NCOA5 variation in type 2 diabetic patients with hepatocellular carcinoma impairs the function of NCOA5 in cell cycle regulation.

Authors:  Xinhui Liu; Feiye Liu; Shenglan Gao; Jake Reske; Aimin Li; Chin-Lee Wu; Chengfeng Yang; Fengsheng Chen; Rongcheng Luo; Hua Xiao
Journal:  Cancer Lett       Date:  2017-01-27       Impact factor: 8.679

Review 2.  Frequently mutated genes/pathways and genomic instability as prevention targets in liver cancer.

Authors:  Chinthalapally V Rao; Adam S Asch; Hiroshi Y Yamada
Journal:  Carcinogenesis       Date:  2016-11-12       Impact factor: 4.944

Review 3.  Mouse models for liver cancer.

Authors:  Latifa Bakiri; Erwin F Wagner
Journal:  Mol Oncol       Date:  2013-02-05       Impact factor: 6.603

Review 4.  Murine models of hepatitis C: what can we look forward to?

Authors:  Markus von Schaewen; Alexander Ploss
Journal:  Antiviral Res       Date:  2014-01-24       Impact factor: 5.970

Review 5.  The war on cancer: are we winning?

Authors:  M J Duffy
Journal:  Tumour Biol       Date:  2013-04-09

6.  Gene copy number variations in the leukocyte genome of hepatocellular carcinoma patients with integrated hepatitis B virus DNA.

Authors:  Yanan Pang; Weixing Guo; Jiaqi Wang; Guixia Xu; Kai Cheng; Guangwen Cao; Mengchao Wu; Shuqun Cheng; Shanrong Liu
Journal:  Oncotarget       Date:  2016-02-16

7.  Therapeutic strategies for hepatocellular carcinoma: new advances and challenges.

Authors:  Sílvia Vilarinho; Tamar Taddei
Journal:  Curr Treat Options Gastroenterol       Date:  2015-06

8.  Vy-PER: eliminating false positive detection of virus integration events in next generation sequencing data.

Authors:  Michael Forster; Silke Szymczak; David Ellinghaus; Georg Hemmrich; Malte Rühlemann; Lars Kraemer; Sören Mucha; Lars Wienbrandt; Martin Stanulla; Andre Franke
Journal:  Sci Rep       Date:  2015-07-13       Impact factor: 4.379

9.  Pseudogene INTS6P1 regulates its cognate gene INTS6 through competitive binding of miR-17-5p in hepatocellular carcinoma.

Authors:  Haoran Peng; Masaharu Ishida; Ling Li; Atsushi Saito; Atsushi Kamiya; James P Hamilton; Rongdang Fu; Alexandru V Olaru; Fangmei An; Irinel Popescu; Razvan Iacob; Simona Dima; Sorin T Alexandrescu; Razvan Grigorie; Anca Nastase; Ioana Berindan-Neagoe; Ciprian Tomuleasa; Florin Graur; Florin Zaharia; Michael S Torbenson; Esteban Mezey; Minqiang Lu; Florin M Selaru
Journal:  Oncotarget       Date:  2015-03-20

10.  Genomic characterization of a large panel of patient-derived hepatocellular carcinoma xenograft tumor models for preclinical development.

Authors:  Qingyang Gu; Bin Zhang; Hongye Sun; Qiang Xu; Yexiong Tan; Guan Wang; Qin Luo; Weiguo Xu; Shuqun Yang; Jian Li; Jing Fu; Lei Chen; Shengxian Yuan; Guibai Liang; Qunsheng Ji; Shu-Hui Chen; Chi-Chung Chan; Weiping Zhou; Xiaowei Xu; Hongyang Wang; Douglas D Fang
Journal:  Oncotarget       Date:  2015-08-21
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