Literature DB >> 23010061

Rupture of single receptor-ligand bonds: a new insight into probability distribution function.

V K Gupta1.   

Abstract

Single molecule force spectroscopy is widely used to determine kinetic parameters of dissociation by analyzing bond rupture data obtained via applying mechanical force to cells, capsules, and beads that are attached to an intermolecular bond. The current analysis assumes that the intermolecular bond force is equal to the externally applied mechanical force. We confirm that viscous drag alone or in combination with cellular deformation resulting in viscoelasticity modulates bond force so that the instantaneous intermolecular bond force is not equivalent to the applied force. The bond force modulation leads to bond rupture time and force histograms that differ from those predicted by probability distribution function (PDF) using the current approach. A new methodology that accounts for bond force modulation in obtaining PDF is presented. The predicted histograms from the new methodology are in excellent agreement with the respective histograms obtained from Monte Carlo simulation.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 23010061      PMCID: PMC3508194          DOI: 10.1016/j.colsurfb.2012.07.020

Source DB:  PubMed          Journal:  Colloids Surf B Biointerfaces        ISSN: 0927-7765            Impact factor:   5.268


  41 in total

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4.  Theory, analysis, and interpretation of single-molecule force spectroscopy experiments.

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6.  Energy landscapes of receptor-ligand bonds explored with dynamic force spectroscopy.

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9.  Enhancement of L-selectin, but not P-selectin, bond formation frequency by convective flow.

Authors:  Christopher D Paschall; William H Guilford; Michael B Lawrence
Journal:  Biophys J       Date:  2007-09-21       Impact factor: 4.033

10.  Low spring constant regulates P-selectin-PSGL-1 bond rupture.

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Journal:  Biophys J       Date:  2008-08-29       Impact factor: 4.033

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  1 in total

1.  Stochastic simulation of single-molecule pulling experiments.

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  1 in total

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