Literature DB >> 23005173

Communities and bottlenecks: trees and treelike networks have high modularity.

James P Bagrow1.   

Abstract

Much effort has gone into understanding the modular nature of complex networks. Communities, also known as clusters or modules, are typically considered to be densely interconnected groups of nodes that are only sparsely connected to other groups in the network. Discovering high quality communities is a difficult and important problem in a number of areas. The most popular approach is the objective function known as modularity, used both to discover communities and to measure their strength. To understand the modular structure of networks it is then crucial to know how such functions evaluate different topologies, what features they account for, and what implicit assumptions they may make. We show that trees and treelike networks can have unexpectedly and often arbitrarily high values of modularity. This is surprising since trees are maximally sparse connected graphs and are not typically considered to possess modular structure, yet the nonlocal null model used by modularity assigns low probabilities, and thus high significance, to the densities of these sparse tree communities. We further study the practical performance of popular methods on model trees and on a genealogical data set and find that the discovered communities also have very high modularity, often approaching its maximum value. Statistical tests reveal the communities in trees to be significant, in contrast with known results for partitions of sparse, random graphs.

Mesh:

Year:  2012        PMID: 23005173     DOI: 10.1103/PhysRevE.85.066118

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  7 in total

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Journal:  Sci Rep       Date:  2013-01-14       Impact factor: 4.379

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Journal:  Sci Rep       Date:  2013-10-14       Impact factor: 4.379

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Authors:  Hyung Jun Woo
Journal:  Sci Rep       Date:  2013-11-25       Impact factor: 4.379

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Authors:  Sergi Valverde
Journal:  Front Physiol       Date:  2017-07-13       Impact factor: 4.566

5.  Node Attribute-enhanced Community Detection in Complex Networks.

Authors:  Caiyan Jia; Yafang Li; Matthew B Carson; Xiaoyang Wang; Jian Yu
Journal:  Sci Rep       Date:  2017-05-25       Impact factor: 4.379

6.  Post-Processing Partitions to Identify Domains of Modularity Optimization.

Authors:  William H Weir; Scott Emmons; Ryan Gibson; Dane Taylor; Peter J Mucha
Journal:  Algorithms       Date:  2017-08-19

7.  Inverse Resolution Limit of Partition Density and Detecting Overlapping Communities by Link-Surprise.

Authors:  Juyong Lee; Zhong-Yuan Zhang; Jooyoung Lee; Bernard R Brooks; Yong-Yeol Ahn
Journal:  Sci Rep       Date:  2017-09-29       Impact factor: 4.379

  7 in total

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