Literature DB >> 23004808

Comment on "transient-state fluctuationlike relation for the driving force on a biomolecule".

David D L Minh1.   

Abstract

Two analytically tractable systems, Brownian particles in (i) moving harmonic oscillator or (ii) with a time-dependent natural frequency, obey a force fluctuation theorem similar to that proposed by Ponmurugan and Vemparala [Phys. Rev. E 84, 060101(R) (2011)]. Many of their results can be explained by using the former case as a model.

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Year:  2012        PMID： 23004808      PMCID： PMC3666580          DOI： 10.1103/PhysRevE.85.053103

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN： 1539-3755


  6 in total

1.  Free energy reconstruction from nonequilibrium single-molecule pulling experiments.

Authors:  G Hummer; A Szabo
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-27       Impact factor: 11.205

2.  Calculating potentials of mean force from steered molecular dynamics simulations.

Authors:  Sanghyun Park; Klaus Schulten
Journal:  J Chem Phys       Date:  2004-04-01       Impact factor: 3.488

3.  Transient-state fluctuationlike relation for the driving force on a biomolecule.

Authors:  M Ponmurugan; Satyavani Vemparala
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-12-12

4.  Springs and speeds in free energy reconstruction from irreversible single-molecule pulling experiments.

Authors:  David D L Minh; J Andrew McCammon
Journal:  J Phys Chem B       Date:  2007-12-19       Impact factor: 2.991

5.  Density-dependent analysis of nonequilibrium paths improves free energy estimates.

Authors:  David D L Minh
Journal:  J Chem Phys       Date:  2009-05-28       Impact factor: 3.488

6.  Path integral analysis of Jarzynski's equality: analytical results.

Authors:  David D L Minh; Artur B Adib
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-02-18
  6 in total

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