Literature DB >> 23001990

Structural basis for proton conduction and inhibition by the influenza M2 protein.

Mei Hong1, William F DeGrado.   

Abstract

The influenza M2 protein forms an acid-activated and drug-sensitive proton channel in the virus envelope that is important for the virus lifecycle. The functional properties and high-resolution structures of this proton channel have been extensively studied to understand the mechanisms of proton conduction and drug inhibition. We review biochemical and electrophysiological studies of M2 and discuss how high-resolution structures have transformed our understanding of this proton channel. Comparison of structures obtained in different membrane-mimetic solvents and under different pH using X-ray crystallography, solution NMR, and solid-state NMR spectroscopy revealed how the M2 structure depends on the environment and showed that the pharmacologically relevant drug-binding site lies in the transmembrane (TM) pore. Competing models of proton conduction have been evaluated using biochemical experiments, high-resolution structural methods, and computational modeling. These results are converging to a model in which a histidine residue in the TM domain mediates proton relay with water, aided by microsecond conformational dynamics of the imidazole ring. These mechanistic insights are guiding the design of new inhibitors that target drug-resistant M2 variants and may be relevant for other proton channels.
Copyright © 2012 The Protein Society.

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Year:  2012        PMID: 23001990      PMCID: PMC3527700          DOI: 10.1002/pro.2158

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  109 in total

Review 1.  Influence of solubilizing environments on membrane protein structures.

Authors:  Timothy A Cross; Mukesh Sharma; Myunggi Yi; Huan-Xiang Zhou
Journal:  Trends Biochem Sci       Date:  2010-08-18       Impact factor: 13.807

Review 2.  Oligomeric structure, dynamics, and orientation of membrane proteins from solid-state NMR.

Authors:  Mei Hong
Journal:  Structure       Date:  2006-12       Impact factor: 5.006

3.  Reversion of influenza A (H3N2) virus from amantadine resistant to amantadine sensitive by further reassortment in Japan during the 2006-to-2007 influenza season.

Authors:  Yuki Furuse; Akira Suzuki; Taro Kamigaki; Midori Shimizu; Naoko Fuji; Hitoshi Oshitani
Journal:  J Clin Microbiol       Date:  2008-12-24       Impact factor: 5.948

4.  Distinct domains of the influenza a virus M2 protein cytoplasmic tail mediate binding to the M1 protein and facilitate infectious virus production.

Authors:  Matthew F McCown; Andrew Pekosz
Journal:  J Virol       Date:  2006-08       Impact factor: 5.103

5.  Free energy calculations on the two drug binding sites in the M2 proton channel.

Authors:  Ruo-Xu Gu; Limin Angela Liu; Dong-Qing Wei; Jian-Guo Du; Lei Liu; Hong Liu
Journal:  J Am Chem Soc       Date:  2011-06-28       Impact factor: 15.419

6.  Tidal surge in the M2 proton channel, sensed by 2D IR spectroscopy.

Authors:  Ayanjeet Ghosh; Jade Qiu; William F DeGrado; Robin M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

Review 7.  Solid-state NMR studies of amyloid fibril structure.

Authors:  Robert Tycko
Journal:  Annu Rev Phys Chem       Date:  2011       Impact factor: 12.703

8.  Adamantane- and oseltamivir-resistant seasonal A (H1N1) and pandemic A (H1N1) 2009 influenza viruses in Guangdong, China, during 2008 and 2009.

Authors:  Jie Zhou; Lirong Zou; Xin Zhang; Jiazheng Liao; Hanzhong Ni; Nianmei Hou; Yajing Wang; Hui Li; Jie Wu; Marcel Jonges; Adam Meijer; Marion Koopmans; Changwen Ke
Journal:  J Clin Microbiol       Date:  2011-05-18       Impact factor: 5.948

9.  Two models of the influenza A M2 channel domain: verification by comparison.

Authors:  L R Forrest; W F DeGrado; G R Dieckmann; M S Sansom
Journal:  Fold Des       Date:  1998

10.  The interplay of functional tuning, drug resistance, and thermodynamic stability in the evolution of the M2 proton channel from the influenza A virus.

Authors:  Amanda L Stouffer; Chunlong Ma; Lidia Cristian; Yuki Ohigashi; Robert A Lamb; James D Lear; Lawrence H Pinto; William F DeGrado
Journal:  Structure       Date:  2008-07       Impact factor: 5.006

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  76 in total

1.  An M2-V27A channel blocker demonstrates potent in vitro and in vivo antiviral activities against amantadine-sensitive and -resistant influenza A viruses.

Authors:  Yanmei Hu; Rami Musharrafieh; Chunlong Ma; Jiantao Zhang; Donald F Smee; William F DeGrado; Jun Wang
Journal:  Antiviral Res       Date:  2017-01-10       Impact factor: 5.970

2.  Conformational analysis of the full-length M2 protein of the influenza A virus using solid-state NMR.

Authors:  Shu Yu Liao; Keith J Fritzsching; Mei Hong
Journal:  Protein Sci       Date:  2013-10-07       Impact factor: 6.725

Review 3.  Philosophy of voltage-gated proton channels.

Authors:  Thomas E DeCoursey; Jonathan Hosler
Journal:  J R Soc Interface       Date:  2013-12-18       Impact factor: 4.118

4.  Activation and proton transport mechanism in influenza A M2 channel.

Authors:  Chenyu Wei; Andrew Pohorille
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

5.  2D IR spectroscopy reveals the role of water in the binding of channel-blocking drugs to the influenza M2 channel.

Authors:  Ayanjeet Ghosh; Jun Wang; Yurii S Moroz; Ivan V Korendovych; Martin Zanni; William F DeGrado; Feng Gai; Robin M Hochstrasser
Journal:  J Chem Phys       Date:  2014-06-21       Impact factor: 3.488

6.  Chemical ligation of the influenza M2 protein for solid-state NMR characterization of the cytoplasmic domain.

Authors:  Byungsu Kwon; Daniel Tietze; Paul B White; Shu Y Liao; Mei Hong
Journal:  Protein Sci       Date:  2015-05-27       Impact factor: 6.725

7.  The Influenza M2 Ectodomain Regulates the Conformational Equilibria of the Transmembrane Proton Channel: Insights from Solid-State Nuclear Magnetic Resonance.

Authors:  Byungsu Kwon; Mei Hong
Journal:  Biochemistry       Date:  2016-09-12       Impact factor: 3.162

8.  Design and expeditious synthesis of organosilanes as potent antivirals targeting multidrug-resistant influenza A viruses.

Authors:  Yanmei Hu; Yuanxiang Wang; Fang Li; Chunlong Ma; Jun Wang
Journal:  Eur J Med Chem       Date:  2017-04-20       Impact factor: 6.514

9.  Combination of ¹⁵N reverse labeling and afterglow spectroscopy for assigning membrane protein spectra by magic-angle-spinning solid-state NMR: application to the multidrug resistance protein EmrE.

Authors:  James R Banigan; Anindita Gayen; Nathaniel J Traaseth
Journal:  J Biomol NMR       Date:  2013-03-29       Impact factor: 2.835

10.  High-resolution structures of the M2 channel from influenza A virus reveal dynamic pathways for proton stabilization and transduction.

Authors:  Jessica L Thomaston; Mercedes Alfonso-Prieto; Rahel A Woldeyes; James S Fraser; Michael L Klein; Giacomo Fiorin; William F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-02       Impact factor: 11.205

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