Literature DB >> 23000885

The performance of density functional based methods in the description of selected biological systems and processes.

Marta E Alberto1, Tiziana Marino, Nino Russo, Emilia Sicilia, Marirosa Toscano.   

Abstract

The catalytic mechanism of the purple acid phosphatase enzyme, electronic and structural properties of AT(GC)Zn(2)(OH)(2)(H(2)O)(2), a metal mediated DNA dimer, and UV-vis spectroscopic features of the chlorophyll-a (Chl-a) system, a potential photosensitizer, are the three different and interesting topics chosen to verify how the oldest and the most recent density functional methods work in the description of biological systems. Reported data indicate that good results can be obtained provided that computational strategies, exchange-correlation functionals and basis sets are carefully selected and applied.

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Year:  2012        PMID: 23000885     DOI: 10.1039/c2cp41836c

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  6 in total

1.  DFT investigation of the mismatched base pairs (T-Hg-T)3, (U-Hg-U)3, d(T-Hg-T)2, and d(U-Hg-U)2.

Authors:  Tiziana Marino
Journal:  J Mol Model       Date:  2014-05-31       Impact factor: 1.810

2.  Spatial and Temporal Resolution of the Oxygen-Independent Photoinduced DNA Interstrand Cross-Linking by a Nitroimidazole Derivative.

Authors:  Abdelazim M A Abdelgawwad; Antonio Monari; Iñaki Tuñón; Antonio Francés-Monerris
Journal:  J Chem Inf Model       Date:  2022-06-30       Impact factor: 6.162

3.  Metallobacteriochlorophylls as potential dual agents for photodynamic therapy and chemotherapy.

Authors:  Dorota Rutkowska-Zbik; Małgorzata Witko
Journal:  J Mol Model       Date:  2013-01-12       Impact factor: 1.810

4.  First-Principles Calculations on Ni,Fe-Containing Carbon Monoxide Dehydrogenases Reveal Key Stereoelectronic Features for Binding and Release of CO2 to/from the C-Cluster.

Authors:  Raffaella Breglia; Federica Arrigoni; Matteo Sensi; Claudio Greco; Piercarlo Fantucci; Luca De Gioia; Maurizio Bruschi
Journal:  Inorg Chem       Date:  2020-12-15       Impact factor: 5.165

Review 5.  Application of TD-DFT Theory to Studying Porphyrinoid-Based Photosensitizers for Photodynamic Therapy: A Review.

Authors:  Agnieszka Drzewiecka-Matuszek; Dorota Rutkowska-Zbik
Journal:  Molecules       Date:  2021-11-26       Impact factor: 4.411

6.  Chalcogen Effects in the Photophysical Properties of Dimethylamino-1,8-naphthalimide Dyes Revealed by DFT Investigation.

Authors:  Marta Erminia Alberto; Bruna Clara De Simone; Tiziana Marino; Marirosa Toscano; Nino Russo
Journal:  J Phys Chem A       Date:  2022-07-27       Impact factor: 2.944

  6 in total

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