Literature DB >> 22999827

In situ microbial metabolism of aromatic-hydrocarbon environmental pollutants.

Che Ok Jeon1, Eugene L Madsen.   

Abstract

Microbial processes that eliminate organic environmental contamination are important. Progress in the biotechnology of biodegradation relies upon the underlying sciences of environmental microbiology and analytical geochemistry. Recent key discoveries advancing knowledge of biodegradation (in general) and the aromatic-hydrocarbon biodegradation (in particular) have relied upon characterization of microorganisms: pure-culture isolates, laboratory enrichment cultures, and in contaminated field sites. New analytical and molecular tools (ranging from sequencing the DNA of biodegrading microorganisms to assessing changes in the isotopic ratios of 13C to 12C and 2H to 1H in contaminant pools in field sites) have deepened our insights into the mechanisms (how), the occurrence (what), and the identity (who) of active players that effect biodegradation of organic environmental pollutants.
Copyright © 2012. Published by Elsevier Ltd.

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Year:  2012        PMID: 22999827     DOI: 10.1016/j.copbio.2012.09.001

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  12 in total

1.  Linking Microbial Community and Catabolic Gene Structures during the Adaptation of Three Contaminated Soils under Continuous Long-Term Pollutant Stress.

Authors:  Daiana Lima-Morales; Ruy Jáuregui; Amelia Camarinha-Silva; Robert Geffers; Dietmar H Pieper; Ramiro Vilchez-Vargas
Journal:  Appl Environ Microbiol       Date:  2016-02-05       Impact factor: 4.792

2.  Microbial diversity in degraded and non-degraded petroleum samples and comparison across oil reservoirs at local and global scales.

Authors:  Isabel Natalia Sierra-Garcia; Bruna M Dellagnezze; Viviane P Santos; Michel R Chaves B; Ramsés Capilla; Eugenio V Santos Neto; Neil Gray; Valeria M Oliveira
Journal:  Extremophiles       Date:  2016-12-03       Impact factor: 2.395

3.  Characterizing the Microbial Consortium L1 Capable of Efficiently Degrading Chlorimuron-Ethyl via Metagenome Combining 16S rDNA Sequencing.

Authors:  Xiang Li; Changming Lu; Yumeng Dai; Zhixiong Yu; Wu Gu; Tingting Li; Xinyu Li; Xu Li; Xiujuan Wang; Zhencheng Su; Mingkai Xu; Huiwen Zhang
Journal:  Front Microbiol       Date:  2022-06-23       Impact factor: 6.064

4.  In situ detection of anaerobic alkane metabolites in subsurface environments.

Authors:  Akhil Agrawal; Lisa M Gieg
Journal:  Front Microbiol       Date:  2013-06-04       Impact factor: 5.640

5.  The Genome of the Toluene-Degrading Pseudomonas veronii Strain 1YdBTEX2 and Its Differential Gene Expression in Contaminated Sand.

Authors:  Marian Morales; Vladimir Sentchilo; Claire Bertelli; Andrea Komljenovic; Nadezda Kryuchkova-Mostacci; Audrey Bourdilloud; Burkhard Linke; Alexander Goesmann; Keith Harshman; Francisca Segers; Fabien Delapierre; Damien Fiorucci; Mathieu Seppey; Evgeniya Trofimenco; Pauline Berra; Athimed El Taher; Chloé Loiseau; Dejan Roggero; Madeleine Sulfiotti; Angela Etienne; Gustavo Ruiz Buendia; Loïc Pillard; Angelique Escoriza; Roxane Moritz; Cedric Schneider; Esteban Alfonso; Fatma Ben Jeddou; Oliver Selmoni; Gregory Resch; Gilbert Greub; Olivier Emery; Manupriyam Dubey; Trestan Pillonel; Marc Robinson-Rechavi; Jan Roelof van der Meer
Journal:  PLoS One       Date:  2016-11-03       Impact factor: 3.240

6.  Analysis of Microbial Functions in the Rhizosphere Using a Metabolic-Network Based Framework for Metagenomics Interpretation.

Authors:  Shany Ofaim; Maya Ofek-Lalzar; Noa Sela; Jiandong Jinag; Yechezkel Kashi; Dror Minz; Shiri Freilich
Journal:  Front Microbiol       Date:  2017-08-23       Impact factor: 5.640

7.  Soil mineral composition matters: response of microbial communities to phenanthrene and plant litter addition in long-term matured artificial soils.

Authors:  Doreen Babin; Cordula Vogel; Sebastian Zühlke; Michael Schloter; Geertje Johanna Pronk; Katja Heister; Michael Spiteller; Ingrid Kögel-Knabner; Kornelia Smalla
Journal:  PLoS One       Date:  2014-09-15       Impact factor: 3.240

8.  Further characterization of o-nitrobenzaldehyde degrading bacterium Pseudomonas sp. ONBA-17 and deduction on its metabolic pathway.

Authors:  Fang-Bo Yu; Xiao-Dan Li; Shinawar Waseem Ali; Sheng-Dao Shan; Lin-Ping Luo; Li-Bo Guan
Journal:  Braz J Microbiol       Date:  2015-03-04       Impact factor: 2.476

9.  Genome-wide analysis of Sphingomonas wittichii RW1 behaviour during inoculation and growth in contaminated sand.

Authors:  Silvia K Moreno-Forero; Jan Roelof van der Meer
Journal:  ISME J       Date:  2014-06-17       Impact factor: 10.302

10.  Metagenomic analysis of an ecological wastewater treatment plant's microbial communities and their potential to metabolize pharmaceuticals.

Authors:  Ian N Balcom; Heather Driscoll; James Vincent; Meagan Leduc
Journal:  F1000Res       Date:  2016-07-28
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