Literature DB >> 22999332

Rapid identification of pathogens from positive blood cultures by multiplex polymerase chain reaction using the FilmArray system.

Anne J Blaschke1, Caroline Heyrend, Carrie L Byington, Mark A Fisher, Elizabeth Barker, Nicholas F Garrone, Stephanie A Thatcher, Andrew T Pavia, Trenda Barney, Garrison D Alger, Judy A Daly, Kirk M Ririe, Irene Ota, Mark A Poritz.   

Abstract

Sepsis is a leading cause of death. Rapid and accurate identification of pathogens and antimicrobial resistance directly from blood culture could improve patient outcomes. The FilmArray® (FA; Idaho Technology, Salt Lake City, UT, USA) Blood Culture (BC) panel can identify >25 pathogens and 4 antibiotic resistance genes from positive blood cultures in 1 h. We compared a development version of the panel to conventional culture and susceptibility testing on 102 archived blood cultures from adults and children with bacteremia. Of 109 pathogens identified by culture, 95% were identified by FA. Among 111 prospectively collected blood cultures, the FA identified 84 (91%) of 92 pathogens covered by the panel. Among 25 Staphylococcus aureus and 21 Enterococcus species detected, FA identified all culture-proven methicillin-resistant S. aureus and vancomycin-resistant enterococci. The FA BC panel is an accurate method for the rapid identification of pathogens and resistance genes from blood culture.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22999332      PMCID: PMC3496814          DOI: 10.1016/j.diagmicrobio.2012.08.013

Source DB:  PubMed          Journal:  Diagn Microbiol Infect Dis        ISSN: 0732-8893            Impact factor:   2.803


  39 in total

Review 1.  Antibiotics in sepsis.

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3.  Obstacles of Multiplex Real-Time PCR for Bacterial 16S rDNA: Primer Specifity and DNA Decontamination of Taq Polymerase.

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Review 5.  Concepts, principles, and applications of selected molecular biology techniques in clinical biochemistry.

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Journal:  Adv Clin Chem       Date:  1996       Impact factor: 5.394

6.  Two-sided confidence intervals for the single proportion: comparison of seven methods.

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7.  Evaluation of the Vitek 2 system for identification and antimicrobial susceptibility testing of Staphylococcus spp.

Authors:  C Nonhoff; S Rottiers; M J Struelens
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8.  Occurrence and antimicrobial resistance pattern comparisons among bloodstream infection isolates from the SENTRY Antimicrobial Surveillance Program (1997-2002).

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9.  Surviving Sepsis Campaign: international guidelines for management of severe sepsis and septic shock: 2008.

Authors:  R Phillip Dellinger; Mitchell M Levy; Jean M Carlet; Julian Bion; Margaret M Parker; Roman Jaeschke; Konrad Reinhart; Derek C Angus; Christian Brun-Buisson; Richard Beale; Thierry Calandra; Jean-Francois Dhainaut; Herwig Gerlach; Maurene Harvey; John J Marini; John Marshall; Marco Ranieri; Graham Ramsay; Jonathan Sevransky; B Taylor Thompson; Sean Townsend; Jeffrey S Vender; Janice L Zimmerman; Jean-Louis Vincent
Journal:  Crit Care Med       Date:  2008-01       Impact factor: 7.598

10.  FilmArray, an automated nested multiplex PCR system for multi-pathogen detection: development and application to respiratory tract infection.

Authors:  Mark A Poritz; Anne J Blaschke; Carrie L Byington; Lindsay Meyers; Kody Nilsson; David E Jones; Stephanie A Thatcher; Thomas Robbins; Beth Lingenfelter; Elizabeth Amiott; Amy Herbener; Judy Daly; Steven F Dobrowolski; David H-F Teng; Kirk M Ririe
Journal:  PLoS One       Date:  2011-10-19       Impact factor: 3.240

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  66 in total

1.  Optimized Use of the MALDI BioTyper System and the FilmArray BCID Panel for Direct Identification of Microbial Pathogens from Positive Blood Cultures.

Authors:  B Fiori; T D'Inzeo; A Giaquinto; G Menchinelli; F M Liotti; F de Maio; G De Angelis; G Quaranta; D Nagel; M Tumbarello; B Posteraro; M Sanguinetti; T Spanu
Journal:  J Clin Microbiol       Date:  2015-12-16       Impact factor: 5.948

2.  Microbial identification and automated antibiotic susceptibility testing directly from positive blood cultures using MALDI-TOF MS and VITEK 2.

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Journal:  Eur J Clin Microbiol Infect Dis       Date:  2015-11-19       Impact factor: 3.267

3.  Performance of the Verigene Gram-positive blood culture assay for direct detection of Gram-positive organisms and resistance markers in a pediatric hospital.

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4.  Clinical evaluation of the FilmArray blood culture identification panel in identification of bacteria and yeasts from positive blood culture bottles.

Authors:  Osman Altun; Mohammed Almuhayawi; Måns Ullberg; Volkan Ozenci
Journal:  J Clin Microbiol       Date:  2013-10-02       Impact factor: 5.948

5.  Digital Quantification of DNA Replication and Chromosome Segregation Enables Determination of Antimicrobial Susceptibility after only 15 Minutes of Antibiotic Exposure.

Authors:  Nathan G Schoepp; Eugenia M Khorosheva; Travis S Schlappi; Matthew S Curtis; Romney M Humphries; Janet A Hindler; Rustem F Ismagilov
Journal:  Angew Chem Int Ed Engl       Date:  2016-06-30       Impact factor: 15.336

6.  Community-Acquired Pneumonia Requiring Hospitalization among U.S. Adults.

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7.  Performance evaluation of the Verigene® (Nanosphere) and FilmArray® (BioFire®) molecular assays for identification of causative organisms in bacterial bloodstream infections.

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8.  Rapid testing using the Verigene Gram-negative blood culture nucleic acid test in combination with antimicrobial stewardship intervention against Gram-negative bacteremia.

Authors:  Jacqueline T Bork; Surbhi Leekha; Emily L Heil; LiCheng Zhao; Rilwan Badamas; J Kristie Johnson
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Review 9.  Non-phenotypic tests to detect and characterize antibiotic resistance mechanisms in Enterobacteriaceae.

Authors:  Agnese Lupo; Krisztina M Papp-Wallace; Parham Sendi; Robert A Bonomo; Andrea Endimiani
Journal:  Diagn Microbiol Infect Dis       Date:  2013-10-03       Impact factor: 2.803

10.  The global challenge of carbapenem-resistant Enterobacteriaceae in transplant recipients and patients with hematologic malignancies.

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