Literature DB >> 22998749

'Representative Genes', is it OK to use a small amount of data to obtain a phylogeny that is at least close to the true tree?

J L Horreo1.   

Abstract

Despite the problems associated with the one-gene-constructed phylogenetic relationships, recently it has been shown that merely adding more sequences to the analyses is not enough to resolve all the inconsistencies present in these relationships. In this work, the existence of 'representative' genes for groups of species is evaluated in terms of efficiency (costs/benefits), employing the cytochrome c oxidase subunit I (COI) and the penguins' phylogeny as a case study. 'Representative' genes are very useful and they could produce good results for first approaches or humble laboratories, especially if the gene is chosen depending on the time scale and objectives of our work.
© 2012 The Author. Journal of Evolutionary Biology © 2012 European Society For Evolutionary Biology.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22998749     DOI: 10.1111/j.1420-9101.2012.02622.x

Source DB:  PubMed          Journal:  J Evol Biol        ISSN: 1010-061X            Impact factor:   2.411


  4 in total

1.  Minimal barcode distance between two water mite species from Madeira Island: a cautionary tale.

Authors:  Ricardo García-Jiménez; Jose Luis Horreo; Antonio G Valdecasas
Journal:  Exp Appl Acarol       Date:  2017-06-16       Impact factor: 2.132

2.  Development and characterization of 79 nuclear markers amplifying in viviparous and oviparous clades of the European common lizard.

Authors:  J L Horreo; M L Peláez; T Suárez; P S Fitze
Journal:  Genetica       Date:  2017-11-15       Impact factor: 1.082

3.  Were sea level changes during the Pleistocene in the South Atlantic Coastal Plain a driver of speciation in Petunia (Solanaceae)?

Authors:  Aline M C Ramos-Fregonezi; Jeferson N Fregonezi; Gabriela B Cybis; Nelson J R Fagundes; Sandro L Bonatto; Loreta B Freitas
Journal:  BMC Evol Biol       Date:  2015-05-20       Impact factor: 3.260

4.  Revisiting the mitogenomic phylogeny of Salmoninae: new insights thanks to recent sequencing advances.

Authors:  Jose L Horreo
Journal:  PeerJ       Date:  2017-09-18       Impact factor: 2.984

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.