Literature DB >> 22997134

Detecting causality in complex ecosystems.

George Sugihara1, Robert May, Hao Ye, Chih-hao Hsieh, Ethan Deyle, Michael Fogarty, Stephan Munch.   

Abstract

Identifying causal networks is important for effective policy and management recommendations on climate, epidemiology, financial regulation, and much else. We introduce a method, based on nonlinear state space reconstruction, that can distinguish causality from correlation. It extends to nonseparable weakly connected dynamic systems (cases not covered by the current Granger causality paradigm). The approach is illustrated both by simple models (where, in contrast to the real world, we know the underlying equations/relations and so can check the validity of our method) and by application to real ecological systems, including the controversial sardine-anchovy-temperature problem.

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Year:  2012        PMID: 22997134     DOI: 10.1126/science.1227079

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  245 in total

1.  Questionable dynamical evidence for causality between galactic cosmic rays and interannual variation in global temperature.

Authors:  Ming Luo; Holger Kantz; Ngar-Cheung Lau; Wenwen Huang; Yu Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

2.  Reply to Luo et al.: Robustness of causal effects of galactic cosmic rays on interannual variation in global temperature.

Authors:  Hao Ye; George Sugihara; Ethan R Deyle; Robert M May; Kyle Swanson; Anastasios A Tsonis
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

3.  Tracking and forecasting ecosystem interactions in real time.

Authors:  Ethan R Deyle; Robert M May; Stephan B Munch; George Sugihara
Journal:  Proc Biol Sci       Date:  2016-01-13       Impact factor: 5.349

4.  Network inference in stochastic systems from neurons to currencies: Improved performance at small sample size.

Authors:  Danh-Tai Hoang; Juyong Song; Vipul Periwal; Junghyo Jo
Journal:  Phys Rev E       Date:  2019-02       Impact factor: 2.529

5.  Climate, fishing, and fluctuations of sardine and anchovy in the California Current.

Authors:  Martin Lindegren; David M Checkley; Tristan Rouyer; Alec D MacCall; Nils Chr Stenseth
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-08       Impact factor: 11.205

6.  Reply to Hartig and Dormann: The true model myth.

Authors:  Charles T Perretti; Stephan B Munch; George Sugihara
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-15       Impact factor: 11.205

7.  2013 Thomas Willis Award Lecture: Causation and collaboration for stroke research.

Authors:  Eng H Lo
Journal:  Stroke       Date:  2013-11-07       Impact factor: 7.914

8.  Hidden similarities in the dynamics of a weakly synchronous marine metapopulation.

Authors:  Tanya L Rogers; Stephan B Munch
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-23       Impact factor: 11.205

9.  Reconsidering the importance of the past in predator-prey models: both numerical and functional responses depend on delayed prey densities.

Authors:  Jiqiu Li; Andy Fenton; Lee Kettley; Phillip Roberts; David J S Montagnes
Journal:  Proc Biol Sci       Date:  2013-08-07       Impact factor: 5.349

10.  Seasonal food webs with migrations: multi-season models reveal indirect species interactions in the Canadian Arctic tundra.

Authors:  Chantal Hutchison; Frédéric Guichard; Pierre Legagneux; Gilles Gauthier; Joël Bêty; Dominique Berteaux; Dominique Fauteux; Dominique Gravel
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2020-08-31       Impact factor: 4.226

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