Literature DB >> 22991212

Disease-specific databases: why we need them and some recommendations from the Human Variome Project Meeting, May 28, 2011.

Heather J Howard1, Arthur Beaudet, Vera Gil-da-Silva Lopes, Mike Lyne, Graeme Suthers, Peter Van den Akker, Katarzyna Wertheim-Tysarowska, Patrick Willems, Finlay Macrae.   

Abstract

The need for Locus-Specific Databases, with disease-specific experts and curators, is an essential ingredient in a process to enable the benefits of the advances in sequencing and mutational analysis to be realized across the genome. Next generation sequencing provides both astounding opportunities and challenges, especially for genetic counsellors. An approach coordinated at a genome wide, international level, supported by well-organized disease-specific respected organizations is a model most likely to be successful, but committed resourceful professionals working in local poorly resourced environments can make valuable contributions that can grow. Bioinformatic tools to sift and integrate multiple domains of information are being developed, and play a major part in meeting the challenges. Regulation of providers, including a requirement for them to submit mutational information to central databases, also should assist to reach the goals needed to realize the opportunities. There is also a need to agree on governance of Locus-Specific Databases (LSDBs) at an international level, and for adequate international funding to support this need, to ensure humanity reaps the benefits of the current molecular genetic revolution. The Human Variome Project offers this, working also with the other major initiatives with similar objectives. This report concludes with Recommendations for the Human Variome Project stemming from the presentations and discussions at the meeting.
Copyright © 2012 Wiley Periodicals, Inc.

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Year:  2012        PMID: 22991212     DOI: 10.1002/ajmg.a.35392

Source DB:  PubMed          Journal:  Am J Med Genet A        ISSN: 1552-4825            Impact factor:   2.802


  4 in total

1.  Looking back and moving forward: an historical perspective from laboratory genetic counselors.

Authors:  Lindsay H Zetzsche; Katrina E Kotzer; Karen E Wain
Journal:  J Genet Couns       Date:  2013-11-12       Impact factor: 2.537

2.  Human Variome Project Quality Assessment Criteria for Variation Databases.

Authors:  Mauno Vihinen; John M Hancock; Donna R Maglott; Melissa J Landrum; Gerard C P Schaafsma; Peter Taschner
Journal:  Hum Mutat       Date:  2016-03-21       Impact factor: 4.878

3.  New variants, challenges and pitfalls in DMD genotyping: implications in diagnosis, prognosis and therapy.

Authors:  Rosário Santos; Ana Gonçalves; Jorge Oliveira; Emília Vieira; José Pedro Vieira; Teresinha Evangelista; Teresa Moreno; Manuela Santos; Isabel Fineza; Elsa Bronze-da-Rocha
Journal:  J Hum Genet       Date:  2014-07-10       Impact factor: 3.172

4.  IthaGenes: an interactive database for haemoglobin variations and epidemiology.

Authors:  Petros Kountouris; Carsten W Lederer; Pavlos Fanis; Xenia Feleki; John Old; Marina Kleanthous
Journal:  PLoS One       Date:  2014-07-24       Impact factor: 3.240

  4 in total

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