| Literature DB >> 22988907 |
Zenglei Hu1, Jiao Hu, Shunlin Hu, Xiaowen Liu, Xiaoquan Wang, Jie Zhu, Xiufan Liu.
Abstract
BACKGROUND: Genotype VIId Newcastle disease virus (NDV) isolates induce more severe damage to lymphoid tissues, especially to the spleen, when compared to virulent viruses of other genotypes. However, the biological basis of the unusual pathological changes remains largely unknown.Entities:
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Year: 2012 PMID: 22988907 PMCID: PMC3489799 DOI: 10.1186/1743-422X-9-208
Source DB: PubMed Journal: Virol J ISSN: 1743-422X Impact factor: 4.099
Figure 1Characterization of virus replication in splenocytes. (A) Virus titration of culture supernatants from virus-infected splenocytes using plaque formation test in CEF. (B) Analysis of viral M gene transcription profiles using qRT-PCR. The transcription levels of viral M gene were normalized to those of β-actin gene in the corresponding sample. Asterisk (*) indicates significant difference at p < 0.05 (n = 3) between experimental groups.
Background information of NDV strains used in this study
| JS5/05 | Goose | 2005 | VIId | JN631747 | 109.2 |
| JS3/05 | Fowl | 2005 | VIId | JN618349 | 109.2 |
| F48E8 | Fowl | 1946 | IX | AY260113 | 1010.3 |
| Herts/33 | Fowl | 1933 | IV | AY741404 | 108.6 |
Figure 2Detection of free nucleosomal DNA in the cytoplasm of infected splenocytes. Cytoplasmic fractions of inoculated cells were used for detection of fragmented DNA by ELISA. Asterisk (*) indicates significant difference at p < 0.05 (n = 3) between experimental groups.
Figure 3Determination of mRNA expression of IFN-α, IFN-β and IFN-γ genes in the splenocytes. Profiles of IFN-α, IFN-β and IFN-γ gene expression were shown in panel A, B and C respectively. The standard curve method was used to analyze the fold change of relative gene expression levels between mock-infected and infected cells. Relative expression levels were normalized to the internal β-actin. The data are the mean fold change ± standard deviation (SD).
Figure 4Annexin-V and PI doubling staining of virus-inoculated splenocytes. (A) JS3/05. (B) JS5/05. (C) F48E8. (D) Herts/33. (E) Control. Green: early apoptotic cells with PS exposure upon the outer leaflet of the cell membrane (Annexin-V +); Green and red: late necrotic cells with PS exposure and the ruptured membrane (Annexin-V/PI +); Red: released cellular DNA from leaky necrotic cells (PI +). Magnification, × 400.
Primers for real-time PCR
| IFN-α | Forward primer: CCACGACATCCTTCAGCACCT Reverse primer: TGAGGAGGCTTTGGCGTTG | NM_205427.1 | 89 |
| IFN-β | Forward primer: TGCACAGCATCCTACTGCTCTTG Reverse primer: GTTGGCATCCTGGTGACGAA | NM_001024836.1 | 83 |
| IFN-γ | Forward primer: AGCATTTGAACTGAGCCATCACC Reverse primer: CGTCAGCTACATCTGAATGACTTG | NM_205149.1 | 181 |
| β-actin | Forward primer: ATTGTCCACCGCAAATGCTTC Reverse primer: AAATAAAGCCATGCCAATCTCGTC | NM_205518.1 | 113 |
| M | Forward primer: GCTTGTGAAGGCGAGAGGTG Reverse primer: AACCTGGGGAGAGGCATTTG | -- a | 99 |
a: primers for viral M gene were designed based on the results of sequence comparison as described in the Methods.