Literature DB >> 22987200

Enhanced enantioselectivity of a carboxyl esterase from Rhodobacter sphaeroides by directed evolution.

Jingbo Ma1, Lian Wu, Fei Guo, Jiali Gu, Xiaoling Tang, Ling Jiang, Ji Liu, Jiahai Zhou, Hongwei Yu.   

Abstract

The present work created an esterase variant from Rhodobacter sphaeroides (RspE) with enhanced selectivity in hydrolytic kinetic resolutions by directed evolution. A "model" substrate, methyl mandelate, was introduced in the high-throughput screening procedure. E values of a variant CH (Asn62Cys/Leu145His) for six different esters were 10-83, which were a relative improvement compared to 2-20 for the wild type. Our subsequent crystal structure interpretation and molecular dynamics simulations helped shed light on the source of enantioselectivity modified by directed evolution. Though mutations displayed no "direct" interaction with the substrate, they were hypothesized to strengthen the intramolecular interaction in the catalytic cavity of variant. Conformation analysis revealed that the enhanced enantioselectivity of variant CH for the seven substrates applied in this study was derived from the decrease in size of the substrate binding pocket.

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Year:  2012        PMID: 22987200     DOI: 10.1007/s00253-012-4396-2

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  5 in total

1.  Biochemical characterization of a carboxylesterase from the archaeon Pyrobaculum sp. 1860 and a rational explanation of its substrate specificity and thermostability.

Authors:  Hua Shao; Li Xu; Yunjun Yan
Journal:  Int J Mol Sci       Date:  2014-09-23       Impact factor: 5.923

2.  Crystal structure of Pelagibacterium halotolerans PE8: New insight into its substrate-binding pattern.

Authors:  Ying-Yi Huo; Suhua Li; Jing Huang; Zhen Rong; Zhao Wang; Zhengyang Li; Rui Ji; Siyun Kuang; Heng-Lin Cui; Jixi Li; Xue-Wei Xu
Journal:  Sci Rep       Date:  2017-06-30       Impact factor: 4.379

Review 3.  Computational tools for the evaluation of laboratory-engineered biocatalysts.

Authors:  Adrian Romero-Rivera; Marc Garcia-Borràs; Sílvia Osuna
Journal:  Chem Commun (Camb)       Date:  2016-12-22       Impact factor: 6.222

Review 4.  Conserved Metabolic and Evolutionary Themes in Microbial Degradation of Carbamate Pesticides.

Authors:  Harshit Malhotra; Sukhjeet Kaur; Prashant S Phale
Journal:  Front Microbiol       Date:  2021-07-07       Impact factor: 5.640

5.  Comparative analysis of the human serine hydrolase OVCA2 to the model serine hydrolase homolog FSH1 from S. cerevisiae.

Authors:  Jessica S Bun; Michael D Slack; Daniel E Schemenauer; R Jeremy Johnson
Journal:  PLoS One       Date:  2020-03-17       Impact factor: 3.240

  5 in total

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