Literature DB >> 22982436

The lemur revolution starts now: the genomic coming of age for a non-model organism.

Anne D Yoder1.   

Abstract

Morris Goodman was a revolutionary. Together with a mere handful of like-minded scientists, Morris established himself as a leader in the molecular phylogenetic revolution of the 1960s. The effects of this revolution are most evident in this journal, which he founded in 1992. Happily for lemur biologists, one of Morris Goodman's primary interests was in reconstructing the phylogeny of the primates, including the tooth-combed Lorisifomes of Africa and Asia, and the Lemuriformes of Madagascar (collectively referred to as the suborder Strepsirrhini). This paper traces the development of molecular phylogenetic and evolutionary genetic trends and methods over the 50-year expanse of Morris Goodman's career, particularly as they apply to our understanding of lemuriform phylogeny, biogeography, and biology. Notably, this perspective reveals that the lemuriform genome is sufficiently rich in phylogenetic signal such that the very earliest molecular phylogenetic studies - many of which were conducted by Goodman himself - have been validated by contemporary studies that have exploited advanced computational methods applied to phylogenomic scale data; studies that were beyond imagining in the earliest days of phylogeny reconstruction. Nonetheless, the frontier still beckons. New technologies for gathering and analyzing genomic data will allow investigators to build upon what can now be considered a nearly-known phylogeny of the Lemuriformes in order to ask innovative questions about the evolutionary mechanisms that generate and maintain the extraordinary breadth and depth of biological diversity within this remarkable clade of primates.
Copyright © 2012 Elsevier Inc. All rights reserved.

Mesh:

Year:  2012        PMID: 22982436     DOI: 10.1016/j.ympev.2012.08.024

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  8 in total

Review 1.  An evaluation of the status of living collections for plant, environmental, and microbial research.

Authors:  Kevin McCLUSKEY; Jill P Parsons; Kimberly Quach; Clifford S Duke
Journal:  J Biosci       Date:  2017-06       Impact factor: 1.826

2.  Spontaneous Spongiform Brainstem Degeneration in a Young Mouse Lemur (Microcebus murinus) with Conspicuous Behavioral, Motor, Growth, and Ocular Pathologies.

Authors:  Daniel Schmidtke; Charlotte Lempp; Marko Dubicanac; Ute Radespiel; Elke Zimmermann; Wolfgang Baumgärtner; Sabine Kästner; Martin Meier; Anne Balkema-Buschmann; R Alan Harris; Muthuswamy Raveendran; Donna M Muzny; Kim C Worley; Jeffrey Rogers
Journal:  Comp Med       Date:  2018-11-28       Impact factor: 0.982

3.  Evolutionary history inferred from the de novo assembly of a nonmodel organism, the blue-eyed black lemur.

Authors:  Wynn K Meyer; Aarti Venkat; Amir R Kermany; Bryce van de Geijn; Sidi Zhang; Molly Przeworski
Journal:  Mol Ecol       Date:  2015-08-24       Impact factor: 6.185

4.  Molecular evolutionary characterization of a V1R subfamily unique to strepsirrhine primates.

Authors:  Anne D Yoder; Lauren M Chan; Mario dos Reis; Peter A Larsen; C Ryan Campbell; Rodin Rasoloarison; Meredith Barrett; Christian Roos; Peter Kappeler; Joseph Bielawski; Ziheng Yang
Journal:  Genome Biol Evol       Date:  2014-01       Impact factor: 3.416

5.  Life history profiles for 27 strepsirrhine primate taxa generated using captive data from the Duke Lemur Center.

Authors:  Sarah M Zehr; Richard G Roach; David Haring; Julie Taylor; Freda H Cameron; Anne D Yoder
Journal:  Sci Data       Date:  2014-07-22       Impact factor: 6.444

Review 6.  The Mouse Lemur, a Genetic Model Organism for Primate Biology, Behavior, and Health.

Authors:  Camille Ezran; Caitlin J Karanewsky; Jozeph L Pendleton; Alex Sholtz; Maya R Krasnow; Jason Willick; Andriamahery Razafindrakoto; Sarah Zohdy; Megan A Albertelli; Mark A Krasnow
Journal:  Genetics       Date:  2017-06       Impact factor: 4.562

7.  Hybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus).

Authors:  Peter A Larsen; R Alan Harris; Yue Liu; Shwetha C Murali; C Ryan Campbell; Adam D Brown; Beth A Sullivan; Jennifer Shelton; Susan J Brown; Muthuswamy Raveendran; Olga Dudchenko; Ido Machol; Neva C Durand; Muhammad S Shamim; Erez Lieberman Aiden; Donna M Muzny; Richard A Gibbs; Anne D Yoder; Jeffrey Rogers; Kim C Worley
Journal:  BMC Biol       Date:  2017-11-16       Impact factor: 7.431

8.  Phylogeographic analysis of the true lemurs (genus Eulemur) underlines the role of river catchments for the evolution of micro-endemism in Madagascar.

Authors:  Matthias Markolf; Peter M Kappeler
Journal:  Front Zool       Date:  2013-11-14       Impact factor: 3.172

  8 in total

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