Literature DB >> 22982434

Using multiple analytical methods to improve phylogenetic hypotheses in Minaria (Apocynaceae).

Patrícia Luz Ribeiro1, Alessandro Rapini, Uiara Catharina Soares E Silva, Cássio van den Berg.   

Abstract

Metastelmatinae is a neotropical subtribe of Asclepiadoideae (Apocynaceae), comprising 13 genera and around 260 species whose phylogenetic relationships are often unresolved or incongruent between plastid and nuclear datasets. The genus Minaria is one of the first lineages to emerge in the Metastelmatinae and is highly supported based on plastid markers. It comprises 21 species, most of which are endemic to small areas with open vegetation in the Espinhaço Range, Brazil. In the work presented here, we use plastid (rps16, trnH-psbA, trnS-trnG, and trnD-trnT) and nuclear (ITS and ETS) datasets to investigate the relationships within Minaria. We show that the three methods mostly used in phylogenetic studies, namely, maximum parsimony, maximum likelihood, and Bayesian Inference, have different performances and that a pluralistic analytical approach combining results from them can increase tree resolution and clade confidence, providing valuable phylogenetic information.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22982434     DOI: 10.1016/j.ympev.2012.08.019

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  1 in total

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Authors:  Thomas Jung; Marília Horta Jung; Joan F Webber; Koji Kageyama; Ayaka Hieno; Hayato Masuya; Seiji Uematsu; Ana Pérez-Sierra; Anna R Harris; Jack Forster; Helen Rees; Bruno Scanu; Sneha Patra; Tomáš Kudláček; Josef Janoušek; Tamara Corcobado; Ivan Milenković; Zoltán Nagy; Ildikó Csorba; József Bakonyi; Clive M Brasier
Journal:  J Fungi (Basel)       Date:  2021-03-18
  1 in total

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