Literature DB >> 22978512

Toward understanding the redox properties of model chromophores from the green fluorescent protein family: an interplay between conjugation, resonance stabilization, and solvent effects.

Debashree Ghosh1, Atanu Acharya, Subodh C Tiwari, Anna I Krylov.   

Abstract

The redox properties of model chromophores from the green fluorescent protein family are characterized computationally using density functional theory with a long-range corrected functional, the equation-of-motion coupled-cluster method, and implicit solvation models. The analysis of electron-donating abilities of the chromophores reveals an intricate interplay between the size of the chromophore, conjugation, resonance stabilization, presence of heteroatoms, and solvent effects. Our best estimates of the gas-phase vertical/adiabatic detachment energies of the deprotonated (i.e., anionic) model red, green, and blue chromophores are 3.27/3.15, 2.79/2.67, and 2.75/2.35 eV, respectively. Vertical/adiabatic ionization energies of the respective protonated (i.e., neutral) species are 7.64/7.35, 7.38/7.15, and 7.70/7.32 eV, respectively. The standard reduction potentials (E(red)(0)) of the anionic (Chr•/Chr–) and neutral (Chr+•/Chr) model chromophores in acetonitrile are 0.34/1.40 V (red), 0.22/1.24 V (green), and −0.12/1.02 V (blue), suggesting, counterintuitively, that the red chromophore is more difficult to oxidize than the green and blue ones (in both neutral and deprotonated forms). The respective redox potentials in water follow a similar trend but are more positive than the acetonitrile values.

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Year:  2012        PMID: 22978512     DOI: 10.1021/jp305022t

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  5 in total

1.  ortho and para chromophores of green fluorescent protein: controlling electron emission and internal conversion.

Authors:  Conor McLaughlin; Mariana Assmann; Michael A Parkes; Joanne L Woodhouse; Ross Lewin; Helen C Hailes; Graham A Worth; Helen H Fielding
Journal:  Chem Sci       Date:  2016-11-07       Impact factor: 9.825

2.  The hydroperoxyl radical scavenging activity of sulfuretin: insights from theory.

Authors:  Nguyen Thi Hoa; Do Thi Ngoc Hang; Do Phu Hieu; Huynh Van Truong; Loc Phuoc Hoang; Adam Mechler; Quan V Vo
Journal:  R Soc Open Sci       Date:  2021-07-28       Impact factor: 2.963

3.  Theoretical insights into the antiradical activity and copper-catalysed oxidative damage of mexidol in the physiological environment.

Authors:  Nguyen Thi Hoa; Mai Van Bay; Adam Mechler; Quan V Vo
Journal:  R Soc Open Sci       Date:  2022-01-12       Impact factor: 2.963

4.  Multiphoton photochemistry of red fluorescent proteins in solution and live cells.

Authors:  Mikhail Drobizhev; Caleb Stoltzfus; Igor Topol; Jack Collins; Geoffrey Wicks; Alexander Mikhaylov; Lauren Barnett; Thomas E Hughes; Aleksander Rebane
Journal:  J Phys Chem B       Date:  2014-07-23       Impact factor: 2.991

5.  Multiphoton Bleaching of Red Fluorescent Proteins and the Ways to Reduce It.

Authors:  Mikhail Drobizhev; Rosana S Molina; Jacob Franklin
Journal:  Int J Mol Sci       Date:  2022-01-11       Impact factor: 5.923

  5 in total

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