Literature DB >> 22969661

5-Amino-3-anilino-1H-pyrazole-4-carbonitrile.

Shaaban K Mohamed, Mehmet Akkurt, Frank R Fronczek, Mahmoud A A El-Remaily, Antar A Abdelhamid.   

Abstract

In the title compound, C(10)H(9)N(5), the phenyl ring is twisted with respect to the pyrazole ring, forming a dihedral angle of 24.00 (6)°. In the crystal, mol-ecules are linked by N-H⋯N hydrogen bonds into chains running parallel to [010] containing alternating R(2) (2)(6) and R(2) (2)(12) rings. Further inter-actions are found in the crystal, viz. N-H⋯π(phen-yl) inter-actions and weak face-to-face π-π stacking inter-actions [centroid-centroid distance = 3.8890 (6) Å] between the centroids of the pyrazole and phenyl rings are observed.

Entities:  

Year:  2012        PMID: 22969661      PMCID: PMC3435815          DOI: 10.1107/S1600536812036045

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological activities of pyrazoles, see: Kaushik et al. (2010 ▶); Sheikh et al. (2009 ▶); Krishnamurthy et al. (2004 ▶); Grimmett (1970 ▶). For the use of related compounds as bridging ligands, see: Lynch & McClenaghan (2005 ▶). For the synthesis of the title compound, see: Soliman et al. (2010 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C10H9N5 M = 199.22 Orthorhombic, a = 6.3441 (1) Å b = 11.1354 (2) Å c = 13.7754 (3) Å V = 973.15 (3) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 90 K 0.25 × 0.17 × 0.08 mm

Data collection

Bruker Kappa APEXII DUO diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.978, T max = 0.993 32878 measured reflections 2975 independent reflections 2767 reflections with I > 2σ(I) R int = 0.035 Standard reflections: 0

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.086 S = 1.09 2975 reflections 152 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.32 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812036045/tk5143sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812036045/tk5143Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812036045/tk5143Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H9N5F(000) = 416
Mr = 199.22Dx = 1.360 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 9908 reflections
a = 6.3441 (1) Åθ = 2.4–30.5°
b = 11.1354 (2) ŵ = 0.09 mm1
c = 13.7754 (3) ÅT = 90 K
V = 973.15 (3) Å3Plate, colourless
Z = 40.25 × 0.17 × 0.08 mm
Bruker Kappa APEXII DUO diffractometer2975 independent reflections
Radiation source: fine-focus sealed tube2767 reflections with I > 2σ(I)
TRIUMPH curved graphite monochromatorRint = 0.035
φ and ω scansθmax = 30.6°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −9→9
Tmin = 0.978, Tmax = 0.993k = −15→15
32878 measured reflectionsl = −19→19
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.086w = 1/[σ2(Fo2) + (0.0494P)2 + 0.1533P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max = 0.001
2975 reflectionsΔρmax = 0.32 e Å3
152 parametersΔρmin = −0.20 e Å3
4 restraintsAbsolute structure: nd
Primary atom site location: structure-invariant direct methods
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.50345 (15)−0.01004 (8)0.89839 (7)0.0142 (2)
N20.71282 (15)0.15769 (8)0.94613 (7)0.0154 (2)
N30.89266 (15)0.16812 (8)1.00299 (7)0.0168 (2)
N41.13973 (17)0.05235 (10)1.09010 (8)0.0234 (3)
N50.84875 (15)−0.24944 (9)1.03572 (7)0.0204 (3)
C10.40580 (18)0.15607 (10)0.78868 (8)0.0173 (3)
C20.2548 (2)0.20761 (11)0.72811 (8)0.0205 (3)
C30.06057 (19)0.15345 (11)0.71341 (8)0.0213 (3)
C40.01783 (19)0.04497 (11)0.75945 (8)0.0193 (3)
C50.16597 (18)−0.00746 (10)0.82040 (7)0.0152 (3)
C60.36064 (16)0.04854 (9)0.83683 (7)0.0130 (2)
C70.66942 (16)0.04110 (9)0.94711 (7)0.0122 (2)
C80.81769 (17)−0.02408 (9)1.00460 (8)0.0133 (2)
C90.96026 (17)0.06332 (10)1.03764 (8)0.0153 (3)
C100.83277 (17)−0.14847 (9)1.02122 (7)0.0145 (2)
H10.536000.193000.797000.0210*
H1N0.459 (3)−0.0771 (13)0.9176 (12)0.027 (4)*
H20.284800.279700.697000.0250*
H3−0.039600.189100.673400.0260*
H3N0.958 (3)0.2358 (13)1.0116 (14)0.034 (5)*
H4−0.111100.007200.749300.0230*
H50.13580−0.080200.850500.0180*
H111.200 (3)0.1170 (14)1.1129 (13)0.038 (5)*
H121.165 (3)−0.0151 (14)1.1162 (13)0.036 (5)*
U11U22U33U12U13U23
N10.0145 (4)0.0093 (4)0.0189 (4)−0.0012 (3)−0.0034 (4)0.0031 (3)
N20.0152 (4)0.0112 (4)0.0197 (4)−0.0003 (3)−0.0030 (3)−0.0012 (3)
N30.0178 (4)0.0117 (4)0.0208 (4)−0.0023 (3)−0.0038 (3)−0.0005 (3)
N40.0219 (5)0.0230 (5)0.0253 (5)−0.0035 (4)−0.0095 (4)0.0041 (4)
N50.0189 (5)0.0160 (4)0.0262 (5)0.0023 (4)0.0001 (4)0.0038 (4)
C10.0189 (5)0.0150 (5)0.0179 (5)−0.0012 (4)−0.0018 (4)0.0018 (4)
C20.0260 (6)0.0172 (5)0.0183 (5)0.0030 (4)−0.0029 (4)0.0044 (4)
C30.0206 (5)0.0250 (6)0.0182 (5)0.0068 (5)−0.0037 (4)0.0018 (4)
C40.0144 (5)0.0251 (5)0.0184 (5)0.0007 (4)−0.0004 (4)−0.0010 (4)
C50.0134 (5)0.0170 (4)0.0153 (4)−0.0011 (4)0.0010 (4)0.0006 (4)
C60.0136 (4)0.0126 (4)0.0129 (4)0.0025 (4)−0.0004 (3)−0.0002 (3)
C70.0124 (4)0.0105 (4)0.0137 (4)0.0007 (4)0.0005 (4)0.0003 (3)
C80.0128 (4)0.0126 (4)0.0145 (4)0.0008 (3)0.0001 (4)0.0011 (3)
C90.0157 (4)0.0155 (5)0.0147 (4)−0.0005 (4)0.0002 (3)0.0004 (4)
C100.0125 (4)0.0164 (4)0.0147 (4)0.0011 (4)0.0008 (3)0.0017 (3)
N1—C61.4020 (14)C2—C31.3868 (17)
N1—C71.3724 (14)C3—C41.3910 (17)
N2—N31.3888 (14)C4—C51.3889 (16)
N2—C71.3272 (13)C5—C61.4019 (15)
N3—C91.3318 (14)C7—C81.4279 (15)
N4—C91.3541 (15)C8—C91.4044 (15)
N5—C101.1464 (14)C8—C101.4072 (14)
N1—H1N0.841 (15)C1—H10.9300
N3—H3N0.868 (16)C2—H20.9300
N4—H110.874 (17)C3—H30.9300
N4—H120.848 (16)C4—H40.9300
C1—C21.3940 (16)C5—H50.9300
C1—C61.3985 (15)
C6—N1—C7126.77 (9)N1—C7—N2124.06 (9)
N3—N2—C7104.27 (8)N1—C7—C8124.46 (9)
N2—N3—C9113.17 (9)C7—C8—C9104.58 (9)
C6—N1—H1N112.8 (13)C7—C8—C10129.45 (10)
C7—N1—H1N118.2 (12)C9—C8—C10125.85 (10)
N2—N3—H3N122.8 (12)N3—C9—N4122.76 (10)
C9—N3—H3N123.9 (12)N3—C9—C8106.48 (9)
C9—N4—H12117.7 (12)N4—C9—C8130.69 (11)
H11—N4—H12119.7 (17)N5—C10—C8178.64 (11)
C9—N4—H11119.1 (12)C2—C1—H1120.00
C2—C1—C6119.71 (10)C6—C1—H1120.00
C1—C2—C3121.26 (11)C1—C2—H2119.00
C2—C3—C4118.97 (11)C3—C2—H2119.00
C3—C4—C5120.58 (11)C2—C3—H3121.00
C4—C5—C6120.45 (10)C4—C3—H3121.00
N1—C6—C1123.57 (9)C3—C4—H4120.00
N1—C6—C5117.39 (9)C5—C4—H4120.00
C1—C6—C5119.00 (9)C4—C5—H5120.00
N2—C7—C8111.48 (9)C6—C5—H5120.00
C7—N1—C6—C5−159.01 (10)C2—C3—C4—C50.99 (17)
C6—N1—C7—N23.39 (17)C3—C4—C5—C60.32 (16)
C7—N1—C6—C123.65 (16)C4—C5—C6—C1−1.90 (15)
C6—N1—C7—C8−176.20 (10)C4—C5—C6—N1−179.36 (10)
C7—N2—N3—C90.38 (12)N1—C7—C8—C9178.44 (10)
N3—N2—C7—C80.53 (12)N2—C7—C8—C10−177.26 (11)
N3—N2—C7—N1−179.10 (10)N1—C7—C8—C102.37 (18)
N2—N3—C9—N4176.12 (10)N2—C7—C8—C9−1.19 (12)
N2—N3—C9—C8−1.13 (13)C7—C8—C9—N31.35 (12)
C6—C1—C2—C3−0.88 (17)C10—C8—C9—N40.7 (2)
C2—C1—C6—N1179.46 (10)C7—C8—C9—N4−175.60 (12)
C2—C1—C6—C52.16 (16)C10—C8—C9—N3177.60 (10)
C1—C2—C3—C4−0.71 (17)
D—H···AD—HH···AD···AD—H···A
N1—H1N···N5i0.84 (2)2.15 (2)2.9934 (13)179 (2)
N3—H3N···N2ii0.87 (2)2.09 (2)2.8947 (13)154 (2)
C1—H1···N20.932.372.9152 (15)117
N4—H12···Cg2iii0.85 (2)2.51 (2)3.2011 (12)140 (2)
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 is the centroid of the C1–C6 phenyl ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯N5i 0.84 (2)2.15 (2)2.9934 (13)179 (2)
N3—H3N⋯N2ii 0.87 (2)2.09 (2)2.8947 (13)154 (2)
N4—H12⋯Cg2iii 0.85 (2)2.51 (2)3.2011 (12)140 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  Synthesis, biological evaluation, and structural studies on N1 and C5 substituted cycloalkyl analogues of the pyrazole class of CB1 and CB2 ligands.

Authors:  Mathangi Krishnamurthy; Wei Li; Bob M Moore
Journal:  Bioorg Med Chem       Date:  2004-01-15       Impact factor: 3.641

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  N'-[(5-chloro-3-methyl-1-phenyl-1H-pyrazol-4-yl)methylene] 2/4-substituted hydrazides: synthesis and anticonvulsant activity.

Authors:  Darpan Kaushik; Suroor Ahmad Khan; Gita Chawla; Suresh Kumar
Journal:  Eur J Med Chem       Date:  2010-06-01       Impact factor: 6.514

4.  1-(5-Hydr-oxy-3-methyl-1-phenyl-1H-pyrazol-4-yl)ethanone: a new monoclinic polymorph.

Authors:  Tasneem Ullah Sheikh; Misbahul Ain Khan; Muhammad Nadeem Arshad; Islam Ullah Khan; Helen Stoeckli-Evans
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-17

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.