| Literature DB >> 22969632 |
Xiao-Hong Wei1, Hong Yan, Wei-Gong Lin.
Abstract
The title compound, C(12)H(10)N(2)O(2)·H(2)O, crystallizes as a zwitterion in which the pyridine N atom is protonated and the carb-oxy -OH group is deprotonated. The benzene and pyridinium rings are inclined with a dihedral angle of 6.63 (5)° between them. In the crystal, inter-molecular O-H⋯O and N-H⋯O hydrogen-bonding inter-actions link adjacent mol-ecules into a two-dimensional double layered supra-molecular network.Entities:
Year: 2012 PMID: 22969632 PMCID: PMC3435761 DOI: 10.1107/S1600536812035854
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H10N2O2·H2O | |
| Monoclinic, | Mo |
| Hall symbol: P 2yn | Cell parameters from 1672 reflections |
| θ = 2.8–27.5° | |
| µ = 0.10 mm−1 | |
| β = 95.165 (14)° | Prism, colorless |
| 0.23 × 0.16 × 0.15 mm | |
| Bruker SMART CCD diffractometer | 2554 independent reflections |
| Radiation source: fine-focus sealed tube | 1505 reflections with |
| Graphite monochromator | |
| phi and ω scans | θmax = 27.5°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 11449 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2554 reflections | (Δ/σ)max < 0.001 |
| 160 parameters | Δρmax = 0.17 e Å−3 |
| 3 restraints | Δρmin = −0.16 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.5962 (4) | 0.7159 (4) | 0.15326 (17) | 0.0568 (8) | |
| C2 | 0.6222 (4) | 0.7885 (4) | 0.08526 (18) | 0.0669 (9) | |
| H2C | 0.6003 | 0.9042 | 0.0767 | 0.080* | |
| C3 | 0.6796 (4) | 0.6884 (4) | 0.03225 (17) | 0.0647 (9) | |
| H3A | 0.6927 | 0.7373 | −0.0128 | 0.078* | |
| C4 | 0.7203 (4) | 0.5123 (4) | 0.04277 (15) | 0.0522 (7) | |
| C5 | 0.6949 (4) | 0.4505 (4) | 0.11010 (16) | 0.0600 (8) | |
| H5A | 0.7200 | 0.3362 | 0.1205 | 0.072* | |
| C6 | 0.7823 (4) | 0.4004 (4) | −0.01377 (15) | 0.0528 (7) | |
| C7 | 0.8241 (4) | 0.4649 (4) | −0.08022 (16) | 0.0642 (9) | |
| H7B | 0.8121 | 0.5815 | −0.0895 | 0.077* | |
| C8 | 0.8830 (4) | 0.3594 (4) | −0.13264 (16) | 0.0648 (9) | |
| H8C | 0.9119 | 0.4067 | −0.1761 | 0.078* | |
| C9 | 0.8999 (4) | 0.1853 (4) | −0.12169 (15) | 0.0555 (7) | |
| C10 | 0.8584 (5) | 0.1196 (4) | −0.05641 (17) | 0.0728 (10) | |
| H10A | 0.8683 | 0.0025 | −0.0478 | 0.087* | |
| C11 | 0.8022 (5) | 0.2251 (4) | −0.00347 (18) | 0.0770 (11) | |
| H11A | 0.7770 | 0.1774 | 0.0404 | 0.092* | |
| C12 | 0.9664 (4) | 0.0670 (4) | −0.17777 (17) | 0.0634 (8) | |
| N1 | 0.6345 (3) | 0.5496 (3) | 0.16235 (13) | 0.0606 (7) | |
| H1A | 0.6200 | 0.5033 | 0.2036 | 0.073* | |
| N2 | 0.5351 (3) | 0.8023 (4) | 0.20782 (15) | 0.0693 (8) | |
| H2A | 0.5210 | 0.7511 | 0.2481 | 0.083* | |
| H2B | 0.5100 | 0.9091 | 0.2027 | 0.083* | |
| O1 | 1.0359 (3) | 0.1364 (3) | −0.22902 (12) | 0.0757 (7) | |
| O2 | 0.9515 (4) | −0.0921 (3) | −0.17007 (13) | 0.0853 (8) | |
| O3 | 0.4085 (4) | 1.1412 (3) | 0.16247 (15) | 0.0866 (8) | |
| H3C | 0.300 (3) | 1.128 (6) | 0.165 (2) | 0.130* | |
| H3D | 0.447 (5) | 1.207 (5) | 0.1977 (19) | 0.130* |
| C1 | 0.0564 (17) | 0.0549 (18) | 0.0606 (19) | −0.0067 (14) | 0.0137 (14) | −0.0057 (14) |
| C2 | 0.085 (2) | 0.0504 (17) | 0.068 (2) | −0.0074 (16) | 0.0206 (17) | 0.0030 (16) |
| C3 | 0.082 (2) | 0.0570 (18) | 0.0581 (19) | −0.0106 (16) | 0.0216 (16) | 0.0042 (15) |
| C4 | 0.0583 (17) | 0.0535 (17) | 0.0454 (16) | −0.0112 (14) | 0.0088 (13) | 0.0015 (12) |
| C5 | 0.075 (2) | 0.0542 (17) | 0.0516 (17) | 0.0010 (16) | 0.0116 (15) | 0.0009 (14) |
| C6 | 0.0579 (17) | 0.0570 (17) | 0.0441 (16) | −0.0110 (14) | 0.0079 (13) | −0.0008 (13) |
| C7 | 0.091 (2) | 0.0542 (17) | 0.0480 (17) | −0.0022 (17) | 0.0119 (16) | 0.0042 (14) |
| C8 | 0.091 (2) | 0.065 (2) | 0.0397 (16) | −0.0048 (18) | 0.0144 (15) | 0.0046 (14) |
| C9 | 0.0617 (17) | 0.0595 (18) | 0.0452 (16) | −0.0059 (14) | 0.0042 (13) | −0.0028 (13) |
| C10 | 0.109 (3) | 0.058 (2) | 0.0543 (19) | 0.0010 (19) | 0.0242 (18) | 0.0045 (15) |
| C11 | 0.124 (3) | 0.058 (2) | 0.0527 (18) | −0.003 (2) | 0.0330 (19) | 0.0092 (15) |
| C12 | 0.072 (2) | 0.069 (2) | 0.0497 (18) | −0.0034 (17) | 0.0087 (15) | −0.0035 (16) |
| N1 | 0.0786 (17) | 0.0604 (16) | 0.0444 (14) | −0.0014 (13) | 0.0153 (12) | 0.0001 (12) |
| N2 | 0.0809 (18) | 0.0634 (16) | 0.0668 (17) | −0.0017 (14) | 0.0254 (15) | −0.0080 (13) |
| O1 | 0.1006 (18) | 0.0747 (15) | 0.0557 (13) | −0.0044 (13) | 0.0287 (13) | −0.0042 (11) |
| O2 | 0.130 (2) | 0.0615 (15) | 0.0686 (16) | −0.0009 (15) | 0.0326 (15) | −0.0012 (12) |
| O3 | 0.117 (2) | 0.0677 (16) | 0.0786 (18) | −0.0107 (16) | 0.0272 (16) | −0.0095 (13) |
| C1—N2 | 1.336 (4) | C8—C9 | 1.379 (4) |
| C1—N1 | 1.339 (4) | C8—H8C | 0.9300 |
| C1—C2 | 1.410 (4) | C9—C10 | 1.376 (4) |
| C2—C3 | 1.360 (4) | C9—C12 | 1.514 (4) |
| C2—H2C | 0.9300 | C10—C11 | 1.380 (4) |
| C3—C4 | 1.421 (4) | C10—H10A | 0.9300 |
| C3—H3A | 0.9300 | C11—H11A | 0.9300 |
| C4—C5 | 1.365 (4) | C12—O1 | 1.256 (4) |
| C4—C6 | 1.477 (4) | C12—O2 | 1.257 (4) |
| C5—N1 | 1.355 (4) | N1—H1A | 0.8600 |
| C5—H5A | 0.9300 | N2—H2A | 0.8600 |
| C6—C11 | 1.389 (4) | N2—H2B | 0.8600 |
| C6—C7 | 1.393 (4) | O3—H3C | 0.860 (18) |
| C7—C8 | 1.381 (4) | O3—H3D | 0.861 (18) |
| C7—H7B | 0.9300 | ||
| N2—C1—N1 | 119.0 (3) | C9—C8—H8C | 119.4 |
| N2—C1—C2 | 124.0 (3) | C7—C8—H8C | 119.4 |
| N1—C1—C2 | 117.0 (3) | C10—C9—C8 | 118.0 (3) |
| C3—C2—C1 | 119.6 (3) | C10—C9—C12 | 119.6 (3) |
| C3—C2—H2C | 120.2 | C8—C9—C12 | 122.3 (3) |
| C1—C2—H2C | 120.2 | C9—C10—C11 | 120.9 (3) |
| C2—C3—C4 | 122.8 (3) | C9—C10—H10A | 119.6 |
| C2—C3—H3A | 118.6 | C11—C10—H10A | 119.6 |
| C4—C3—H3A | 118.6 | C10—C11—C6 | 122.0 (3) |
| C5—C4—C3 | 114.7 (3) | C10—C11—H11A | 119.0 |
| C5—C4—C6 | 121.3 (3) | C6—C11—H11A | 119.0 |
| C3—C4—C6 | 124.0 (3) | O1—C12—O2 | 124.3 (3) |
| N1—C5—C4 | 122.4 (3) | O1—C12—C9 | 116.8 (3) |
| N1—C5—H5A | 118.8 | O2—C12—C9 | 119.0 (3) |
| C4—C5—H5A | 118.8 | C1—N1—C5 | 123.5 (3) |
| C11—C6—C7 | 116.4 (3) | C1—N1—H1A | 118.2 |
| C11—C6—C4 | 121.7 (3) | C5—N1—H1A | 118.2 |
| C7—C6—C4 | 121.8 (3) | C1—N2—H2A | 120.0 |
| C8—C7—C6 | 121.4 (3) | C1—N2—H2B | 120.0 |
| C8—C7—H7B | 119.3 | H2A—N2—H2B | 120.0 |
| C6—C7—H7B | 119.3 | H3C—O3—H3D | 108 (3) |
| C9—C8—C7 | 121.2 (3) | ||
| N2—C1—C2—C3 | −177.8 (3) | C7—C8—C9—C10 | −0.8 (5) |
| N1—C1—C2—C3 | 1.7 (5) | C7—C8—C9—C12 | −179.2 (3) |
| C1—C2—C3—C4 | −2.0 (5) | C8—C9—C10—C11 | −0.3 (5) |
| C2—C3—C4—C5 | 0.9 (5) | C12—C9—C10—C11 | 178.1 (3) |
| C2—C3—C4—C6 | 179.8 (3) | C9—C10—C11—C6 | 1.1 (6) |
| C3—C4—C5—N1 | 0.4 (4) | C7—C6—C11—C10 | −0.8 (5) |
| C6—C4—C5—N1 | −178.5 (3) | C4—C6—C11—C10 | 179.3 (3) |
| C5—C4—C6—C11 | 6.1 (5) | C10—C9—C12—O1 | −165.4 (3) |
| C3—C4—C6—C11 | −172.8 (3) | C8—C9—C12—O1 | 12.9 (5) |
| C5—C4—C6—C7 | −173.9 (3) | C10—C9—C12—O2 | 13.6 (5) |
| C3—C4—C6—C7 | 7.3 (5) | C8—C9—C12—O2 | −168.1 (3) |
| C11—C6—C7—C8 | −0.3 (5) | N2—C1—N1—C5 | 179.1 (3) |
| C4—C6—C7—C8 | 179.6 (3) | C2—C1—N1—C5 | −0.4 (5) |
| C6—C7—C8—C9 | 1.2 (5) | C4—C5—N1—C1 | −0.7 (5) |
| H··· | ||||
| N1—H1 | 0.86 | 1.82 | 2.648 (3) | 160 |
| N2—H2 | 0.86 | 2.07 | 2.911 (4) | 167 |
| N2—H2 | 0.86 | 2.09 | 2.921 (4) | 163 |
| O3—H3 | 0.86 (2) | 1.99 (2) | 2.849 (4) | 178 (4) |
| O3—H3 | 0.86 (2) | 1.91 (2) | 2.768 (4) | 176 (5) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.86 | 1.82 | 2.648 (3) | 160 |
| N2—H2 | 0.86 | 2.07 | 2.911 (4) | 167 |
| N2—H2 | 0.86 | 2.09 | 2.921 (4) | 163 |
| O3—H3 | 0.86 (2) | 1.99 (2) | 2.849 (4) | 178 (4) |
| O3—H3 | 0.86 (2) | 1.91 (2) | 2.768 (4) | 176 (5) |
Symmetry codes: (i) ; (ii) ; (iii) .