Literature DB >> 22969611

(Z)-2-(5-Acetyl-4-methyl-3-phenyl-2,3-dihydro-1,3-thia-zol-2-yl-idene)-3-(3-methyl-1-benzofuran-2-yl)-3-oxo-propane-nitrile.

Hoong-Kun Fun, Ching Kheng Quah, Hatem A Abdel-Aziz, Hazem A Ghabbour.   

Abstract

In the title compound, C(24)H(18)N(2)O(3)S, the benzofuran ring system (r.m.s. deviation = 0.010 Å) forms dihedral angles of 83.13 (17) and 8.92 (14)° with the benzene and thia-zole rings, respectively. The dihedral angle between the benzene and thia-zole rings is 84.51 (19)°. The mol-ecular structure features an intra-molecular C-H⋯O hydrogen bond, which closes an S(6) ring. There are no inter-molecular hydrogen bonds observed in this structure.

Entities:  

Year:  2012        PMID: 22969611      PMCID: PMC3435740          DOI: 10.1107/S1600536812035039

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to and the biological activity of benzofuran derivatives, see: Abdel-Aziz et al. (2009) ▶; Abdel-Wahab et al. (2009 ▶). For further synthetic details, see: Dawood et al. (2005 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related structures, see: Fun et al. (2012 ▶); Abdel-Aziz et al. (2012 ▶).

Experimental

Crystal data

C24H18N2O3S M = 414.46 Monoclinic, a = 9.7836 (4) Å b = 6.3682 (3) Å c = 16.2330 (6) Å β = 100.351 (3)° V = 994.92 (7) Å3 Z = 2 Cu Kα radiation μ = 1.69 mm−1 T = 296 K 0.92 × 0.09 × 0.06 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.306, T max = 0.906 7151 measured reflections 2831 independent reflections 2310 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.119 S = 1.01 2831 reflections 275 parameters 1 restraint H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.32 e Å−3 Absolute structure: Flack (1983 ▶), 831 Friedel pairs Flack parameter: 0.03 (3) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL ; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812035039/hb6913sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812035039/hb6913Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812035039/hb6913Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H18N2O3SF(000) = 432
Mr = 414.46Dx = 1.383 Mg m3
Monoclinic, P21Cu Kα radiation, λ = 1.54178 Å
Hall symbol: P 2ybCell parameters from 1283 reflections
a = 9.7836 (4) Åθ = 2.8–65.0°
b = 6.3682 (3) ŵ = 1.69 mm1
c = 16.2330 (6) ÅT = 296 K
β = 100.351 (3)°Needle, yellow
V = 994.92 (7) Å30.92 × 0.09 × 0.06 mm
Z = 2
Bruker SMART APEXII CCD diffractometer2831 independent reflections
Radiation source: fine-focus sealed tube2310 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.041
φ and ω scansθmax = 69.8°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −11→11
Tmin = 0.306, Tmax = 0.906k = −6→7
7151 measured reflectionsl = −19→19
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.119w = 1/[σ2(Fo2) + (0.0714P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.001
2831 reflectionsΔρmax = 0.25 e Å3
275 parametersΔρmin = −0.32 e Å3
1 restraintAbsolute structure: Flack (1983), 831 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.03 (3)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.23468 (9)0.89038 (14)0.13562 (4)0.0454 (2)
N10.1798 (2)0.8805 (5)0.28286 (14)0.0386 (6)
N20.3568 (3)0.4048 (7)0.39528 (18)0.0667 (9)
O10.4965 (2)0.1891 (4)0.26849 (14)0.0482 (6)
O20.3871 (3)0.5930 (5)0.11922 (15)0.0618 (8)
O3−0.0119 (3)1.3800 (6)0.12668 (17)0.0857 (11)
C10.4888 (4)0.3163 (6)0.1977 (2)0.0452 (8)
C20.5710 (4)0.2416 (6)0.1451 (2)0.0454 (8)
C30.6340 (3)0.0518 (6)0.1842 (2)0.0462 (9)
C40.7255 (4)−0.0986 (8)0.1629 (2)0.0600 (10)
H4A0.7602−0.08710.11340.072*
C50.7627 (4)−0.2620 (7)0.2159 (3)0.0659 (12)
H5A0.8227−0.36410.20200.079*
C60.7126 (4)−0.2797 (7)0.2907 (3)0.0615 (11)
H6A0.7400−0.39350.32580.074*
C70.6235 (3)−0.1329 (7)0.3142 (2)0.0542 (9)
H7A0.5910−0.14280.36450.065*
C80.5854 (3)0.0286 (6)0.2590 (2)0.0446 (8)
C90.4003 (4)0.5035 (6)0.1875 (2)0.0453 (8)
C100.3304 (3)0.5853 (6)0.2518 (2)0.0398 (7)
C110.2520 (3)0.7699 (5)0.23210 (18)0.0366 (7)
C120.1271 (4)1.0842 (6)0.1664 (2)0.0440 (8)
C130.1085 (3)1.0533 (6)0.2467 (2)0.0421 (8)
C140.0248 (4)1.1810 (7)0.2967 (2)0.0532 (10)
H14A−0.00851.30500.26590.080*
H14B0.08191.22040.34890.080*
H14C−0.05271.09960.30750.080*
C150.0719 (4)1.2547 (6)0.1092 (2)0.0514 (9)
C160.1266 (4)1.2735 (7)0.0292 (2)0.0591 (11)
H16A0.10201.40830.00440.089*
H16B0.08711.1649−0.00870.089*
H16C0.22591.25930.04060.089*
C170.3444 (3)0.4875 (6)0.3318 (2)0.0446 (8)
C180.1851 (3)0.8306 (5)0.37089 (19)0.0377 (7)
C190.0806 (4)0.7114 (6)0.3935 (2)0.0488 (8)
H19A0.00690.66390.35350.059*
C200.0879 (5)0.6641 (7)0.4774 (3)0.0629 (11)
H20A0.01780.58530.49430.076*
C210.1971 (5)0.7323 (9)0.5355 (2)0.0687 (13)
H21A0.20220.69640.59150.082*
C220.2995 (4)0.8532 (8)0.5121 (2)0.0669 (13)
H22A0.37300.90030.55240.080*
C230.2939 (3)0.9058 (7)0.4283 (2)0.0496 (9)
H23A0.36210.98950.41180.059*
C240.5966 (5)0.3262 (8)0.0633 (2)0.0680 (12)
H24D0.61590.47390.06880.102*
H24C0.51570.30400.02110.102*
H24B0.67460.25520.04760.102*
U11U22U33U12U13U23
S10.0576 (5)0.0388 (5)0.0416 (4)0.0113 (4)0.0137 (3)0.0032 (4)
N10.0428 (14)0.0336 (15)0.0403 (12)0.0021 (14)0.0101 (10)0.0002 (14)
N20.088 (2)0.057 (2)0.0603 (18)0.032 (2)0.0280 (16)0.015 (2)
O10.0559 (15)0.0382 (15)0.0538 (13)0.0121 (11)0.0188 (11)−0.0001 (12)
O20.0834 (19)0.0566 (19)0.0504 (14)0.0275 (16)0.0252 (13)0.0067 (14)
O30.103 (2)0.080 (2)0.0808 (19)0.051 (2)0.0368 (16)0.034 (2)
C10.051 (2)0.037 (2)0.0476 (19)0.0041 (15)0.0099 (15)−0.0022 (15)
C20.051 (2)0.038 (2)0.0480 (18)0.0042 (16)0.0122 (15)−0.0086 (15)
C30.042 (2)0.043 (2)0.0524 (19)0.0005 (15)0.0056 (15)−0.0141 (17)
C40.056 (2)0.057 (3)0.067 (2)0.012 (2)0.0123 (17)−0.021 (2)
C50.056 (2)0.050 (3)0.089 (3)0.021 (2)0.005 (2)−0.018 (2)
C60.052 (2)0.041 (2)0.087 (3)0.0102 (18)0.002 (2)0.003 (2)
C70.048 (2)0.046 (2)0.069 (2)0.0011 (19)0.0105 (16)0.001 (2)
C80.0388 (19)0.035 (2)0.060 (2)0.0044 (15)0.0093 (15)−0.0044 (16)
C90.056 (2)0.032 (2)0.0478 (18)0.0040 (17)0.0091 (15)−0.0048 (16)
C100.0428 (19)0.0297 (18)0.0475 (17)−0.0001 (14)0.0095 (14)0.0002 (15)
C110.0422 (18)0.0340 (19)0.0343 (15)−0.0012 (14)0.0086 (13)−0.0007 (13)
C120.049 (2)0.037 (2)0.0472 (18)0.0065 (16)0.0119 (15)0.0031 (16)
C130.042 (2)0.035 (2)0.0489 (17)0.0040 (14)0.0060 (14)0.0010 (15)
C140.060 (2)0.046 (2)0.055 (2)0.0197 (19)0.0148 (17)0.0006 (19)
C150.057 (2)0.040 (2)0.057 (2)0.0123 (17)0.0098 (17)0.0071 (17)
C160.072 (3)0.052 (3)0.052 (2)0.008 (2)0.0094 (18)0.0144 (19)
C170.047 (2)0.0349 (19)0.055 (2)0.0070 (16)0.0174 (16)−0.0003 (17)
C180.0425 (18)0.0314 (19)0.0407 (16)0.0066 (13)0.0112 (13)0.0004 (13)
C190.049 (2)0.042 (2)0.058 (2)0.0021 (17)0.0161 (16)0.0010 (18)
C200.072 (3)0.050 (3)0.075 (3)0.008 (2)0.036 (2)0.020 (2)
C210.076 (3)0.084 (4)0.049 (2)0.020 (3)0.018 (2)0.020 (2)
C220.066 (3)0.082 (4)0.0483 (19)0.013 (3)0.0006 (17)−0.009 (2)
C230.0476 (19)0.049 (2)0.0528 (18)−0.0024 (19)0.0118 (15)−0.008 (2)
C240.079 (3)0.070 (3)0.060 (2)0.011 (2)0.029 (2)−0.002 (2)
S1—C111.725 (3)C10—C171.425 (4)
S1—C121.752 (4)C12—C131.363 (4)
N1—C111.372 (4)C12—C151.467 (5)
N1—C131.377 (5)C13—C141.493 (4)
N1—C181.456 (4)C14—H14A0.9600
N2—C171.144 (4)C14—H14B0.9600
O1—C81.368 (4)C14—H14C0.9600
O1—C11.396 (4)C15—C161.496 (5)
O2—C91.233 (4)C16—H16A0.9600
O3—C151.213 (5)C16—H16B0.9600
C1—C21.361 (5)C16—H16C0.9600
C1—C91.465 (5)C18—C231.369 (5)
C2—C31.451 (5)C18—C191.375 (4)
C2—C241.494 (5)C19—C201.384 (5)
C3—C81.390 (5)C19—H19A0.9300
C3—C41.396 (5)C20—C211.363 (6)
C4—C51.358 (6)C20—H20A0.9300
C4—H4A0.9300C21—C221.370 (6)
C5—C61.394 (5)C21—H21A0.9300
C5—H5A0.9300C22—C231.393 (5)
C6—C71.378 (5)C22—H22A0.9300
C6—H6A0.9300C23—H23A0.9300
C7—C81.370 (5)C24—H24D0.9600
C7—H7A0.9300C24—H24C0.9600
C9—C101.444 (4)C24—H24B0.9600
C10—C111.409 (5)
C11—S1—C1291.20 (16)C12—C13—C14128.5 (3)
C11—N1—C13115.5 (3)N1—C13—C14119.3 (3)
C11—N1—C18123.1 (3)C13—C14—H14A109.5
C13—N1—C18121.3 (3)C13—C14—H14B109.5
C8—O1—C1106.4 (2)H14A—C14—H14B109.5
C2—C1—O1111.3 (3)C13—C14—H14C109.5
C2—C1—C9128.1 (3)H14A—C14—H14C109.5
O1—C1—C9120.6 (3)H14B—C14—H14C109.5
C1—C2—C3105.6 (3)O3—C15—C12121.8 (3)
C1—C2—C24130.1 (4)O3—C15—C16120.8 (4)
C3—C2—C24124.3 (3)C12—C15—C16117.4 (3)
C8—C3—C4118.7 (4)C15—C16—H16A109.5
C8—C3—C2106.6 (3)C15—C16—H16B109.5
C4—C3—C2134.7 (4)H16A—C16—H16B109.5
C5—C4—C3118.6 (4)C15—C16—H16C109.5
C5—C4—H4A120.7H16A—C16—H16C109.5
C3—C4—H4A120.7H16B—C16—H16C109.5
C4—C5—C6121.2 (4)N2—C17—C10178.4 (4)
C4—C5—H5A119.4C23—C18—C19122.4 (3)
C6—C5—H5A119.4C23—C18—N1118.6 (3)
C7—C6—C5121.6 (4)C19—C18—N1119.0 (3)
C7—C6—H6A119.2C18—C19—C20118.3 (4)
C5—C6—H6A119.2C18—C19—H19A120.9
C8—C7—C6116.2 (3)C20—C19—H19A120.9
C8—C7—H7A121.9C21—C20—C19120.5 (4)
C6—C7—H7A121.9C21—C20—H20A119.8
O1—C8—C7126.3 (3)C19—C20—H20A119.8
O1—C8—C3110.1 (3)C20—C21—C22120.5 (4)
C7—C8—C3123.7 (3)C20—C21—H21A119.7
O2—C9—C10119.8 (3)C22—C21—H21A119.7
O2—C9—C1116.2 (3)C21—C22—C23120.3 (4)
C10—C9—C1124.0 (3)C21—C22—H22A119.9
C11—C10—C17122.1 (3)C23—C22—H22A119.9
C11—C10—C9116.5 (3)C18—C23—C22118.1 (4)
C17—C10—C9121.4 (3)C18—C23—H23A121.0
N1—C11—C10127.6 (3)C22—C23—H23A121.0
N1—C11—S1109.9 (2)C2—C24—H24D109.5
C10—C11—S1122.6 (2)C2—C24—H24C109.5
C13—C12—C15127.9 (3)H24D—C24—H24C109.5
C13—C12—S1111.2 (3)C2—C24—H24B109.5
C15—C12—S1120.9 (3)H24D—C24—H24B109.5
C12—C13—N1112.3 (3)H24C—C24—H24B109.5
C8—O1—C1—C2−0.7 (4)C18—N1—C11—S1−173.8 (2)
C8—O1—C1—C9179.4 (3)C17—C10—C11—N1−0.2 (5)
O1—C1—C2—C30.9 (4)C9—C10—C11—N1−178.1 (3)
C9—C1—C2—C3−179.2 (3)C17—C10—C11—S1179.8 (3)
O1—C1—C2—C24−179.3 (4)C9—C10—C11—S11.9 (4)
C9—C1—C2—C240.6 (7)C12—S1—C11—N1−1.1 (3)
C1—C2—C3—C8−0.8 (4)C12—S1—C11—C10178.9 (3)
C24—C2—C3—C8179.4 (4)C11—S1—C12—C130.2 (3)
C1—C2—C3—C4179.0 (4)C11—S1—C12—C15178.9 (3)
C24—C2—C3—C4−0.8 (7)C15—C12—C13—N1−177.8 (3)
C8—C3—C4—C50.3 (6)S1—C12—C13—N10.7 (4)
C2—C3—C4—C5−179.4 (4)C15—C12—C13—C141.6 (7)
C3—C4—C5—C6−0.7 (6)S1—C12—C13—C14−179.9 (3)
C4—C5—C6—C70.0 (6)C11—N1—C13—C12−1.6 (4)
C5—C6—C7—C81.1 (6)C18—N1—C13—C12174.0 (3)
C1—O1—C8—C7179.8 (3)C11—N1—C13—C14178.9 (3)
C1—O1—C8—C30.1 (4)C18—N1—C13—C14−5.4 (5)
C6—C7—C8—O1178.8 (3)C13—C12—C15—O3−7.9 (7)
C6—C7—C8—C3−1.6 (6)S1—C12—C15—O3173.7 (3)
C4—C3—C8—O1−179.4 (3)C13—C12—C15—C16170.0 (4)
C2—C3—C8—O10.4 (4)S1—C12—C15—C16−8.4 (5)
C4—C3—C8—C70.9 (5)C11—N1—C18—C2382.6 (4)
C2—C3—C8—C7−179.3 (3)C13—N1—C18—C23−92.7 (4)
C2—C1—C9—O28.2 (6)C11—N1—C18—C19−97.8 (4)
O1—C1—C9—O2−172.0 (3)C13—N1—C18—C1986.9 (4)
C2—C1—C9—C10−171.7 (4)C23—C18—C19—C20−1.0 (5)
O1—C1—C9—C108.2 (5)N1—C18—C19—C20179.5 (3)
O2—C9—C10—C11−1.3 (5)C18—C19—C20—C21−0.8 (6)
C1—C9—C10—C11178.5 (3)C19—C20—C21—C221.7 (7)
O2—C9—C10—C17−179.3 (3)C20—C21—C22—C23−0.8 (7)
C1—C9—C10—C170.6 (5)C19—C18—C23—C221.9 (6)
C13—N1—C11—C10−178.2 (3)N1—C18—C23—C22−178.6 (4)
C18—N1—C11—C106.2 (5)C21—C22—C23—C18−1.0 (6)
C13—N1—C11—S11.8 (4)
D—H···AD—HH···AD···AD—H···A
C14—H14A···O30.962.302.999 (5)129
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C14—H14A⋯O30.962.302.999 (5)129
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  3-Methyl-1-benzofuran-2-carbohydrazide.

Authors:  Hatem A Abdel-Aziz; Hazem A Ghabbour; Suchada Chantrapromma; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-31

3.  1-(5-Bromo-1-benzofuran-2-yl)ethanone.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Hatem A Abdel-Aziz
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-12

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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