Literature DB >> 22969595

N-[2-(4-Methyl-benzo-yl)eth-yl]propan-2-aminium chloride.

Abdullah Aydın, Mehmet Akkurt, Halise Inci Gul, Ebru Mete, Ertan Sahin.   

Abstract

In the title compound, C(13)H(20)NO(+)·Cl(-), the protonated amino N atom is hydrogen bonded to the chloride anion. N-H⋯Cl hydrogen bonds link the anions and cations into dimers, which are connected by C-H⋯O hydrogen bonds, forming supra-molecular chains extending along [100].

Entities:  

Year:  2012        PMID: 22969595      PMCID: PMC3435724          DOI: 10.1107/S1600536812035271

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the details of the pharmacological effects of Mannich bases and for their synthesis, see: Dimmock & Kumar (1997 ▶); Gul et al. (2004 ▶; 2005a ▶,b ▶; 2009 ▶); Gul (2005 ▶); Mete et al. (2011a ▶,b ▶); Kucukoglu et al. (2011 ▶); Canturk et al. (2008 ▶); Chen et al. (1991 ▶); Suleyman et al. (2007 ▶); Plastino et al. (1962 ▶, 1964 ▶). For bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶); Etter (1990 ▶). For some related structures, see: Abonia et al. (2011 ▶); Tuzina et al. (2006 ▶).

Experimental

Crystal data

C13H20NO+·Cl− M = 241.75 Monoclinic, a = 7.786 (5) Å b = 7.511 (5) Å c = 23.365 (5) Å β = 95.362 (5)° V = 1360.4 (13) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 294 K 0.17 × 0.11 × 0.10 mm

Data collection

Rigaku R-AXIS RAPID-S diffractometer Absorption correction: multi-scan (Blessing, 1995 ▶) T min = 0.966, T max = 0.974 26900 measured reflections 2800 independent reflections 2007 reflections with I > 2σ(I) R int = 0.066

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.151 S = 1.06 2800 reflections 149 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.18 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear (Rigaku/MSC, 2005 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812035271/qm2078sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812035271/qm2078Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812035271/qm2078Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H20NO+·ClF(000) = 520
Mr = 241.75Dx = 1.180 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4594 reflections
a = 7.786 (5) Åθ = 2.6–26.5°
b = 7.511 (5) ŵ = 0.26 mm1
c = 23.365 (5) ÅT = 294 K
β = 95.362 (5)°Block, white
V = 1360.4 (13) Å30.17 × 0.11 × 0.10 mm
Z = 4
Rigaku R-AXIS RAPID-S diffractometer2800 independent reflections
Radiation source: Sealed Tube2007 reflections with I > 2σ(I)
Graphite Monochromator monochromatorRint = 0.066
Detector resolution: 10.0000 pixels mm-1θmax = 26.4°, θmin = 2.6°
dtprofit.ref scansh = −9→9
Absorption correction: multi-scan (Blessing, 1995)k = −8→9
Tmin = 0.966, Tmax = 0.974l = −29→29
26900 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049H-atom parameters constrained
wR(F2) = 0.151w = 1/[σ2(Fo2) + (0.0681P)2 + 0.2172P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2800 reflectionsΔρmax = 0.21 e Å3
149 parametersΔρmin = −0.18 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), FC*=KFC[1+0.001XFC2Λ3/SIN(2Θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.010 (3)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.7123 (2)0.2422 (3)0.57107 (8)0.0903 (8)
N10.7916 (2)0.0622 (2)0.74056 (7)0.0555 (6)
C11.2949 (3)0.1740 (3)0.53020 (10)0.0722 (9)
C21.2627 (3)0.2488 (3)0.47633 (10)0.0653 (8)
C31.0947 (3)0.2961 (3)0.45820 (9)0.0680 (9)
C40.9644 (3)0.2737 (3)0.49337 (9)0.0659 (8)
C50.9974 (3)0.2024 (3)0.54815 (9)0.0563 (7)
C61.1652 (3)0.1501 (3)0.56544 (10)0.0658 (8)
C70.8564 (3)0.1895 (3)0.58624 (9)0.0616 (8)
C80.8956 (3)0.1133 (3)0.64590 (9)0.0623 (8)
C90.7524 (3)0.1489 (3)0.68361 (9)0.0606 (8)
C100.6625 (3)0.0981 (3)0.78362 (9)0.0611 (8)
C110.6888 (4)0.2830 (4)0.80850 (12)0.0807 (10)
C120.6811 (4)−0.0436 (4)0.82927 (12)0.0864 (10)
C131.4074 (4)0.2830 (5)0.43891 (12)0.0913 (11)
Cl11.17234 (7)0.15576 (7)0.78840 (2)0.0665 (2)
H11.406600.139100.542900.0870*
H31.069500.343700.421600.0820*
H40.852500.306900.480300.0790*
H61.190100.098100.601400.0790*
H8A0.91290−0.014200.643100.0750*
H8B1.001800.165200.663500.0750*
H9A0.739800.276200.688700.0730*
H9B0.644500.102900.665300.0730*
H100.546100.090700.763800.0730*
H11A0.596500.310800.831500.1210*
H11B0.689800.367900.777800.1210*
H11C0.796700.287800.831900.1210*
H12A0.66880−0.158800.811600.1290*
H12B0.59360−0.027900.855200.1290*
H12C0.79290−0.034400.850200.1290*
H13A1.438200.406700.440900.1370*
H13B1.370100.251800.399900.1370*
H13C1.505700.212100.452200.1370*
H14A0.896100.099200.755600.0670*
H14B0.79790−0.056200.735200.0670*
U11U22U33U12U13U23
O10.0562 (10)0.1386 (17)0.0763 (11)0.0110 (11)0.0077 (8)0.0214 (11)
N10.0530 (10)0.0541 (10)0.0609 (10)−0.0019 (8)0.0135 (8)0.0028 (8)
C10.0545 (13)0.0940 (19)0.0683 (15)0.0016 (12)0.0076 (11)0.0037 (13)
C20.0651 (14)0.0730 (15)0.0596 (13)−0.0076 (12)0.0152 (10)−0.0054 (11)
C30.0723 (16)0.0783 (16)0.0541 (13)−0.0016 (12)0.0094 (10)0.0048 (11)
C40.0618 (14)0.0764 (15)0.0596 (13)−0.0001 (12)0.0057 (10)0.0003 (11)
C50.0553 (12)0.0579 (12)0.0555 (12)−0.0054 (10)0.0048 (9)−0.0023 (9)
C60.0625 (14)0.0774 (16)0.0577 (12)0.0004 (11)0.0066 (10)0.0071 (11)
C70.0557 (13)0.0684 (14)0.0609 (13)−0.0038 (11)0.0059 (10)−0.0008 (10)
C80.0574 (13)0.0718 (14)0.0588 (13)−0.0014 (11)0.0111 (10)0.0039 (11)
C90.0584 (13)0.0630 (14)0.0614 (13)0.0002 (10)0.0103 (10)0.0041 (10)
C100.0535 (12)0.0672 (14)0.0653 (13)0.0004 (10)0.0195 (10)0.0012 (10)
C110.0901 (19)0.0698 (16)0.0871 (18)0.0072 (13)0.0350 (14)−0.0041 (13)
C120.108 (2)0.0767 (17)0.0808 (17)0.0039 (15)0.0418 (15)0.0138 (13)
C130.0797 (18)0.120 (2)0.0775 (18)−0.0034 (17)0.0253 (14)0.0074 (16)
Cl10.0631 (4)0.0604 (4)0.0756 (4)0.0010 (3)0.0046 (3)−0.0014 (3)
O1—C71.211 (3)C3—H30.9300
N1—C91.487 (3)C4—H40.9300
N1—C101.511 (3)C6—H60.9300
N1—H14B0.9000C8—H8A0.9700
N1—H14A0.9000C8—H8B0.9700
C1—C61.373 (3)C9—H9A0.9700
C1—C21.380 (3)C9—H9B0.9700
C2—C31.383 (3)C10—H100.9800
C2—C131.511 (4)C11—H11A0.9600
C3—C41.374 (3)C11—H11B0.9600
C4—C51.389 (3)C11—H11C0.9600
C5—C71.480 (3)C12—H12A0.9600
C5—C61.388 (3)C12—H12B0.9600
C7—C81.511 (3)C12—H12C0.9600
C8—C91.508 (3)C13—H13A0.9600
C10—C121.504 (4)C13—H13B0.9600
C10—C111.512 (4)C13—H13C0.9600
C1—H10.9300
C9—N1—C10115.08 (16)C7—C8—H8A109.00
H14A—N1—H14B107.00C7—C8—H8B109.00
C9—N1—H14B109.00C9—C8—H8A109.00
C10—N1—H14A109.00C9—C8—H8B109.00
C9—N1—H14A108.00H8A—C8—H8B108.00
C10—N1—H14B108.00N1—C9—H9A110.00
C2—C1—C6121.3 (2)N1—C9—H9B110.00
C1—C2—C13121.0 (2)C8—C9—H9A110.00
C1—C2—C3118.0 (2)C8—C9—H9B110.00
C3—C2—C13120.9 (2)H9A—C9—H9B108.00
C2—C3—C4121.0 (2)N1—C10—H10109.00
C3—C4—C5121.0 (2)C11—C10—H10109.00
C6—C5—C7122.5 (2)C12—C10—H10109.00
C4—C5—C7119.7 (2)C10—C11—H11A109.00
C4—C5—C6117.7 (2)C10—C11—H11B109.00
C1—C6—C5120.9 (2)C10—C11—H11C109.00
O1—C7—C5121.5 (2)H11A—C11—H11B109.00
C5—C7—C8118.8 (2)H11A—C11—H11C110.00
O1—C7—C8119.7 (2)H11B—C11—H11C109.00
C7—C8—C9112.03 (19)C10—C12—H12A109.00
N1—C9—C8110.12 (18)C10—C12—H12B109.00
N1—C10—C12108.65 (19)C10—C12—H12C109.00
C11—C10—C12112.1 (2)H12A—C12—H12B110.00
N1—C10—C11110.19 (19)H12A—C12—H12C109.00
C2—C1—H1119.00H12B—C12—H12C109.00
C6—C1—H1119.00C2—C13—H13A109.00
C2—C3—H3119.00C2—C13—H13B109.00
C4—C3—H3119.00C2—C13—H13C109.00
C3—C4—H4119.00H13A—C13—H13B110.00
C5—C4—H4120.00H13A—C13—H13C109.00
C1—C6—H6120.00H13B—C13—H13C109.00
C5—C6—H6120.00
C9—N1—C10—C11−76.7 (2)C3—C4—C5—C7176.5 (2)
C9—N1—C10—C12160.08 (19)C4—C5—C6—C12.2 (3)
C10—N1—C9—C8176.31 (17)C7—C5—C6—C1−176.0 (2)
C6—C1—C2—C3−1.3 (3)C6—C5—C7—C8−1.2 (3)
C6—C1—C2—C13177.0 (2)C4—C5—C7—O1−1.1 (3)
C2—C1—C6—C5−0.7 (4)C4—C5—C7—C8−179.4 (2)
C13—C2—C3—C4−176.6 (2)C6—C5—C7—O1177.1 (2)
C1—C2—C3—C41.7 (3)O1—C7—C8—C9−11.9 (3)
C2—C3—C4—C5−0.2 (3)C5—C7—C8—C9166.46 (19)
C3—C4—C5—C6−1.8 (3)C7—C8—C9—N1176.54 (17)
D—H···AD—HH···AD···AD—H···A
N1—H14A···Cl10.902.263.148 (3)172
N1—H14B···Cl1i0.902.253.145 (3)173
C1—H1···O1ii0.932.533.340 (4)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H14A⋯Cl10.902.263.148 (3)172
N1—H14B⋯Cl1i 0.902.253.145 (3)173
C1—H1⋯O1ii 0.932.533.340 (4)146

Symmetry codes: (i) ; (ii) .

  12 in total

1.  Anti-inflammatory activity of bis(3-aryl-3-oxo-propyl)methylamine hydrochloride in rat.

Authors:  Halis Suleyman; Halise Inci Gul; Mustafa Gul; Mustafa Alkan; Fatma Gocer
Journal:  Biol Pharm Bull       Date:  2007-01       Impact factor: 2.233

2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

3.  Synthesis of some Mannich bases with dimethylamine and their hydrazones and evaluation of their cytotoxicity against Jurkat cells.

Authors:  Kaan Kucukoglu; Mustafa Gul; Mustafa Atalay; Ebru Mete; Cavit Kazaz; Osmo Hanninen; Halise Inci Gul
Journal:  Arzneimittelforschung       Date:  2011

4.  The effects of some Mannich bases on heat shock proteins HSC70 and GRP75, and thioredoxin and glutaredoxin levels in Jurkat cells.

Authors:  Mustafa Gul; Mustafa Atalay; Halise Inci Gul; Chitose Nakao; Jani Lappalainen; Osmo Hänninen
Journal:  Toxicol In Vitro       Date:  2005-04-22       Impact factor: 3.500

5.  Evaluation of antimicrobial activities of several mannich bases and their derivatives.

Authors:  Halise Inci Gul; Fikrettin Sahin; Mustafa Gul; Suzan Ozturk; Kadir Ozden Yerdelen
Journal:  Arch Pharm (Weinheim)       Date:  2005-07       Impact factor: 3.751

6.  Effect of some bis Mannich bases and corresponding piperidinols on DNA topoisomerase I.

Authors:  Pakize Canturk; Kaan Kucukoglu; Zeki Topcu; Mustafa Gul; Halise Inci Gul
Journal:  Arzneimittelforschung       Date:  2008

7.  [Synthesis and antiinflammatory and anticancer activities of 2-(E)-(un)substituted benzylidene cyclopentanones and their Mannich base hydro chlorides].

Authors:  H T Chen; Y K Jing; Z Z Ji; B F Zhang
Journal:  Yao Xue Xue Bao       Date:  1991

8.  3-(4-Bromo-phen-yl)-N,N-dimethyl-3-oxopropan-1-aminium chloride.

Authors:  Rodrigo Abonia; Dieter Schollmeyer; Danny Arteaga
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-22

9.  Synthesis and antifungal evaluation of 1-aryl-2-dimethyl- aminomethyl-2-propen-1-one hydrochlorides.

Authors:  Ebru Mete; Halise Inci Gul; Sinan Bilginer; Oztekin Algul; Mehmet Emin Topaloglu; Medine Gulluce; Cavit Kazaz
Journal:  Molecules       Date:  2011-06-03       Impact factor: 4.411

10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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