Literature DB >> 22969548

N,N-Dimethyl-N',N''-bis-(2-methyl-phenyl)phospho-ric triamide mono-hydrate.

Farnaz Eslami, Mehrdad Pourayoubi, Mohammad Yousefi, Arnold L Rheingold, James A Golen.   

Abstract

In the title compound, C(16)H(22)N(3)OP·H(2)O, the P atom adopts a distorted tetra-hedral environment with the bond angles around the P atom in the range 99.98 (7)-116.20 (7)°. The P-N bond length in the [(CH(3))(2)N]P(O) fragment [1.6392 (14) Å] is slightly shorter than two other P-N bonds [1.6439 (15) and 1.6530 (14) Å]. In the (CH(3))(2)NP(O) fragment, one of the methyl groups is syn to the P=O bond, whereas the other one is anti to the P=O bond [C-N-P=O torsion angles = 4.80 (17) and -174.57 (15)°]. In the crystal, the n class="Chemical">water mol-ecules form hydrogen bonds to the O atoms of the P=O bond of two different mol-ecules and act as acceptors for the two amino H atoms of the same mol-ecule. As a result, chains parallel to [010] are formed.

Entities:  

Year:  2012        PMID: 22969548      PMCID: PMC3435677          DOI: 10.1107/S1600536812033995

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For phospho­ramidates having a [(CH3)2N]P(O) fragment and for P=O and P—N bond lengths, see: Pourayoubi, Tarahhomi et al. (2012 ▶); Pourayoubi et al. (2011 ▶). For the double H-atom acceptor capability of the P=O group, see: Pourayoubi, Nečas & Negari (2012 ▶).

Experimental

Crystal data

C16H22N3OP·H2O M = 321.35 Monoclinic, a = 10.7058 (16) Å b = 7.2541 (11) Å c = 22.091 (3) Å β = 90.971 (2)° V = 1715.3 (4) Å3 Z = 4 Mo Kα radiation μ = 0.17 mm−1 T = 100 K 0.20 × 0.14 × 0.14 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.967, T max = 0.977 15201 measured reflections 4036 independent reflections 3135 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.115 S = 1.04 4036 reflections 215 parameters 5 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.38 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 and enCIFer (Allen et al., 2004 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812033995/bt5974sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812033995/bt5974Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H22N3OP·H2OF(000) = 688
Mr = 321.35Dx = 1.244 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4384 reflections
a = 10.7058 (16) Åθ = 3.0–28.1°
b = 7.2541 (11) ŵ = 0.17 mm1
c = 22.091 (3) ÅT = 100 K
β = 90.971 (2)°Block, colourless
V = 1715.3 (4) Å30.20 × 0.14 × 0.14 mm
Z = 4
Bruker APEXII CCD diffractometer4036 independent reflections
Radiation source: fine-focus sealed tube3135 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.050
φ and ω scansθmax = 28.4°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −14→13
Tmin = 0.967, Tmax = 0.977k = −9→9
15201 measured reflectionsl = −29→29
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0495P)2 + 0.3428P] where P = (Fo2 + 2Fc2)/3
4036 reflections(Δ/σ)max < 0.001
215 parametersΔρmax = 0.30 e Å3
5 restraintsΔρmin = −0.38 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
P10.30253 (4)0.63760 (6)0.045212 (19)0.02129 (13)
O1W0.43897 (12)0.18044 (16)0.04084 (6)0.0283 (3)
H1W0.5043 (15)0.175 (3)0.0196 (8)0.034*
H2W0.4105 (16)0.072 (2)0.0412 (8)0.034*
N10.31522 (13)0.49375 (19)−0.01239 (6)0.0235 (3)
H1N0.3457 (17)0.385 (2)−0.0046 (8)0.028*
O10.35590 (11)0.82247 (16)0.03322 (5)0.0273 (3)
N30.15544 (13)0.6646 (2)0.06265 (7)0.0273 (3)
C10.39835 (17)0.6608 (3)0.28289 (8)0.0336 (4)
H10.40260.69100.32470.040*
C20.35064 (16)0.7858 (3)0.24143 (8)0.0314 (4)
H20.32300.90340.25450.038*
C30.34322 (16)0.7391 (2)0.18036 (8)0.0281 (4)
H30.31090.82550.15180.034*
C40.38270 (15)0.5666 (2)0.16075 (7)0.0233 (3)
N20.37225 (13)0.5161 (2)0.09875 (6)0.0243 (3)
H2N0.4025 (17)0.411 (2)0.0871 (8)0.029*
C60.26974 (15)0.5277 (2)−0.07211 (7)0.0232 (3)
C70.27217 (15)0.3843 (2)−0.11509 (8)0.0259 (4)
C80.22525 (16)0.4208 (3)−0.17281 (8)0.0312 (4)
H80.22600.3251−0.20220.037*
C90.17722 (16)0.5919 (3)−0.18920 (8)0.0327 (4)
H90.14450.6125−0.22890.039*
C100.08215 (18)0.5071 (3)0.08193 (10)0.0458 (5)
H10A0.06040.52200.12460.069*
H10B0.13110.39410.07710.069*
H10C0.00550.49920.05720.069*
C110.09013 (19)0.8401 (3)0.06091 (9)0.0403 (5)
H11A0.02060.83330.03160.060*
H11B0.14800.93760.04880.060*
H11C0.05780.86790.10110.060*
C120.22373 (16)0.7000 (2)−0.08851 (8)0.0266 (4)
H120.22360.7970−0.05960.032*
C130.17799 (16)0.7313 (3)−0.14671 (8)0.0309 (4)
H130.14690.8498−0.15740.037*
C140.32410 (18)0.1973 (3)−0.09952 (8)0.0336 (4)
H14A0.31660.1163−0.13490.050*
H14B0.27730.1445−0.06600.050*
H14C0.41230.2091−0.08760.050*
C150.43306 (15)0.4396 (2)0.20245 (8)0.0257 (4)
C160.47558 (18)0.2518 (3)0.18325 (8)0.0330 (4)
H16A0.50790.18430.21860.050*
H16B0.54170.26420.15340.050*
H16C0.40490.18430.16520.050*
C170.43986 (16)0.4911 (3)0.26294 (8)0.0322 (4)
H170.47420.40690.29160.039*
U11U22U33U12U13U23
P10.0220 (2)0.0178 (2)0.0242 (2)−0.00113 (16)0.00295 (16)−0.00023 (16)
O1W0.0330 (7)0.0177 (6)0.0344 (7)−0.0005 (5)0.0081 (5)−0.0033 (5)
N10.0295 (8)0.0169 (7)0.0240 (7)0.0007 (6)0.0004 (6)0.0001 (6)
O10.0294 (6)0.0196 (6)0.0330 (6)−0.0041 (5)0.0035 (5)−0.0014 (5)
N30.0232 (7)0.0259 (8)0.0331 (8)0.0014 (6)0.0046 (6)0.0030 (6)
C10.0321 (10)0.0433 (11)0.0252 (9)−0.0036 (8)−0.0006 (7)−0.0073 (8)
C20.0260 (9)0.0334 (10)0.0347 (10)−0.0008 (8)0.0012 (7)−0.0109 (8)
C30.0281 (9)0.0268 (9)0.0293 (9)0.0019 (7)−0.0020 (7)−0.0030 (7)
C40.0206 (8)0.0248 (9)0.0244 (8)−0.0026 (7)0.0011 (6)−0.0020 (7)
N20.0283 (7)0.0203 (7)0.0244 (7)0.0022 (6)0.0012 (6)−0.0042 (6)
C60.0209 (8)0.0245 (9)0.0242 (8)−0.0050 (6)0.0022 (6)0.0004 (7)
C70.0227 (8)0.0264 (9)0.0287 (9)−0.0049 (7)0.0037 (7)−0.0035 (7)
C80.0286 (9)0.0384 (11)0.0267 (9)−0.0056 (8)0.0025 (7)−0.0057 (8)
C90.0270 (9)0.0453 (12)0.0258 (9)−0.0048 (8)−0.0017 (7)0.0039 (8)
C100.0289 (10)0.0475 (13)0.0613 (14)−0.0055 (9)0.0109 (9)0.0170 (11)
C110.0372 (11)0.0417 (12)0.0422 (11)0.0157 (9)0.0084 (9)0.0062 (9)
C120.0268 (9)0.0239 (9)0.0293 (9)−0.0037 (7)−0.0001 (7)−0.0001 (7)
C130.0278 (9)0.0299 (10)0.0350 (10)−0.0041 (7)−0.0007 (7)0.0078 (8)
C140.0374 (10)0.0297 (10)0.0338 (10)0.0008 (8)−0.0007 (8)−0.0085 (8)
C150.0202 (8)0.0267 (9)0.0302 (9)−0.0030 (7)0.0002 (7)−0.0004 (7)
C160.0391 (10)0.0288 (10)0.0310 (9)0.0033 (8)−0.0018 (8)0.0042 (7)
C170.0295 (9)0.0391 (11)0.0278 (9)−0.0023 (8)−0.0035 (7)0.0006 (8)
P1—O11.4833 (12)C7—C141.504 (2)
P1—N31.6392 (14)C8—C91.389 (3)
P1—N21.6439 (15)C8—H80.9500
P1—N11.6530 (14)C9—C131.380 (3)
O1W—H1W0.850 (14)C9—H90.9500
O1W—H2W0.841 (14)C10—H10A0.9800
N1—C61.420 (2)C10—H10B0.9800
N1—H1N0.871 (14)C10—H10C0.9800
N3—C111.453 (2)C11—H11A0.9800
N3—C101.454 (2)C11—H11B0.9800
C1—C21.381 (3)C11—H11C0.9800
C1—C171.383 (3)C12—C131.387 (2)
C1—H10.9500C12—H120.9500
C2—C31.392 (2)C13—H130.9500
C2—H20.9500C14—H14A0.9800
C3—C41.392 (2)C14—H14B0.9800
C3—H30.9500C14—H14C0.9800
C4—C151.404 (2)C15—C171.388 (2)
C4—N21.420 (2)C15—C161.500 (2)
N2—H2N0.869 (14)C16—H16A0.9800
C6—C121.389 (2)C16—H16B0.9800
C6—C71.409 (2)C16—H16C0.9800
C7—C81.388 (2)C17—H170.9500
O1—P1—N3107.97 (7)C13—C9—H9120.7
O1—P1—N2116.20 (7)C8—C9—H9120.7
N3—P1—N2108.73 (7)N3—C10—H10A109.5
O1—P1—N1113.35 (7)N3—C10—H10B109.5
N3—P1—N1110.37 (7)H10A—C10—H10B109.5
N2—P1—N199.98 (7)N3—C10—H10C109.5
H1W—O1W—H2W105.3 (15)H10A—C10—H10C109.5
C6—N1—P1125.07 (12)H10B—C10—H10C109.5
C6—N1—H1N117.5 (12)N3—C11—H11A109.5
P1—N1—H1N117.1 (12)N3—C11—H11B109.5
C11—N3—C10115.75 (15)H11A—C11—H11B109.5
C11—N3—P1124.21 (12)N3—C11—H11C109.5
C10—N3—P1120.03 (12)H11A—C11—H11C109.5
C2—C1—C17119.38 (17)H11B—C11—H11C109.5
C2—C1—H1120.3C13—C12—C6120.50 (17)
C17—C1—H1120.3C13—C12—H12119.8
C1—C2—C3119.80 (17)C6—C12—H12119.8
C1—C2—H2120.1C9—C13—C12120.55 (18)
C3—C2—H2120.1C9—C13—H13119.7
C4—C3—C2120.53 (17)C12—C13—H13119.7
C4—C3—H3119.7C7—C14—H14A109.5
C2—C3—H3119.7C7—C14—H14B109.5
C3—C4—C15120.06 (15)H14A—C14—H14B109.5
C3—C4—N2120.83 (15)C7—C14—H14C109.5
C15—C4—N2119.11 (15)H14A—C14—H14C109.5
C4—N2—P1125.66 (12)H14B—C14—H14C109.5
C4—N2—H2N119.2 (12)C17—C15—C4117.90 (16)
P1—N2—H2N115.1 (12)C17—C15—C16120.38 (16)
C12—C6—C7119.93 (15)C4—C15—C16121.70 (15)
C12—C6—N1120.84 (15)C15—C16—H16A109.5
C7—C6—N1119.23 (15)C15—C16—H16B109.5
C8—C7—C6117.91 (17)H16A—C16—H16B109.5
C8—C7—C14120.57 (16)C15—C16—H16C109.5
C6—C7—C14121.52 (15)H16A—C16—H16C109.5
C7—C8—C9122.43 (17)H16B—C16—H16C109.5
C7—C8—H8118.8C1—C17—C15122.30 (18)
C9—C8—H8118.8C1—C17—H17118.8
C13—C9—C8118.67 (17)C15—C17—H17118.8
O1—P1—N1—C6−55.73 (15)P1—N1—C6—C7−171.82 (12)
N3—P1—N1—C665.52 (15)C12—C6—C7—C8−1.3 (2)
N2—P1—N1—C6179.92 (13)N1—C6—C7—C8178.99 (14)
O1—P1—N3—C114.80 (17)C12—C6—C7—C14178.50 (16)
N2—P1—N3—C11131.68 (15)N1—C6—C7—C14−1.2 (2)
N1—P1—N3—C11−119.60 (15)C6—C7—C8—C90.3 (2)
O1—P1—N3—C10−174.57 (15)C14—C7—C8—C9−179.55 (16)
N2—P1—N3—C10−47.69 (17)C7—C8—C9—C131.0 (3)
N1—P1—N3—C1061.04 (16)C7—C6—C12—C131.1 (2)
C17—C1—C2—C30.9 (3)N1—C6—C12—C13−179.17 (15)
C1—C2—C3—C40.5 (3)C8—C9—C13—C12−1.2 (3)
C2—C3—C4—C15−1.4 (2)C6—C12—C13—C90.1 (3)
C2—C3—C4—N2178.28 (15)C3—C4—C15—C171.0 (2)
C3—C4—N2—P1−6.6 (2)N2—C4—C15—C17−178.72 (14)
C15—C4—N2—P1173.12 (12)C3—C4—C15—C16179.43 (16)
O1—P1—N2—C461.98 (15)N2—C4—C15—C16−0.2 (2)
N3—P1—N2—C4−60.03 (15)C2—C1—C17—C15−1.3 (3)
N1—P1—N2—C4−175.68 (13)C4—C15—C17—C10.4 (3)
P1—N1—C6—C128.5 (2)C16—C15—C17—C1−178.08 (17)
D—H···AD—HH···AD···AD—H···A
O1W—H2W···O1i0.84 (1)1.91 (2)2.7491 (17)173 (2)
O1W—H1W···O1ii0.85 (1)1.91 (1)2.7607 (17)175 (2)
N1—H1N···O1W0.87 (1)2.04 (2)2.8724 (19)159 (2)
N2—H2N···O1W0.87 (1)2.00 (2)2.8473 (18)164 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H2W⋯O1i 0.84 (1)1.91 (2)2.7491 (17)173 (2)
O1W—H1W⋯O1ii 0.85 (1)1.91 (1)2.7607 (17)175 (2)
N1—H1N⋯O1W 0.87 (1)2.04 (2)2.8724 (19)159 (2)
N2—H2N⋯O1W 0.87 (1)2.00 (2)2.8473 (18)164 (2)

Symmetry codes: (i) ; (ii) .

  4 in total

1.  The double H-atom acceptability of the P=O group in new XP(O)(NHCH2C6H4-2-Cl)2 phosphoramidates [X = C6H5O- and CF3C(O)NH-]: a database analysis of compounds having a P(O)(NHR) group.

Authors:  Mehrdad Pourayoubi; Marek Nečas; Monireh Negari
Journal:  Acta Crystallogr C       Date:  2012-01-06       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Two new XP(O)[NHC(CH3)3]2 phosphoramidates, with X = (CH3)2N and [(CH3)3CNH]2P(O)(O).

Authors:  Mehrdad Pourayoubi; Atekeh Tarahhomi; Fatemeh Karimi Ahmadabad; Karla Fejfarová; Arie van der Lee; Michal Dušek
Journal:  Acta Crystallogr C       Date:  2012-03-14       Impact factor: 1.172

4.  N,N-Dimethyl-N',N''-diphenyl-phospho-ric triamide.

Authors:  Mehrdad Pourayoubi; Mohammad Yousefi; Farnaz Eslami; Arnold L Rheingold; Chao Chen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-09
  4 in total

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