Literature DB >> 22969529

An ortho-rhom-bic polymorph of 2-(1,3-benzothia-zol-2-yl)-6-eth-oxy-phenol.

Hadi Kargar, Reza Kia, Zahra Sharafi, Hossein Jalali Jahromi, Muhammad Nawaz Tahir.   

Abstract

In the title mol-ecule, C(15)H(13)NO(2)S, an intra-molecular O-H⋯N hydrogen bond forms an S(6) ring motif. The benzothia-zole ring system and the benzene ring form a dihedral angle of 8.9 (3) Å. In the crystal, mol-ecules are linked by weak C-H⋯O hydrogen bonds, forming chains along the b axis. In addition, π-π inter-actions [centroid-centroid distances = 3.772 (4) and 3.879 (4) Å] are observed.

Entities:  

Year:  2012        PMID: 22969529      PMCID: PMC3435656          DOI: 10.1107/S1600536812033879

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the monoclinic polymorph, see: Lakshmanan et al. (2011 ▶). For background to and examples of the structures of Schiff base ligands see: Kargar et al. (2011 ▶); Kia et al. (2010 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C15H13NO2S M = 271.32 Orthorhombic, a = 4.8728 (10) Å b = 11.711 (3) Å c = 23.378 (6) Å V = 1334.1 (6) Å3 Z = 4 Mo Kα radiation μ = 0.24 mm−1 T = 296 K 0.33 × 0.23 × 0.21 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.925, T max = 0.952 4083 measured reflections 2239 independent reflections 1207 reflections with I > 2σ(I) R int = 0.073

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.144 S = 0.99 2239 reflections 173 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.30 e Å−3 Absolute structure: Flack (1983 ▶), 874 Friedel pairs Flack parameter: −0.1 (2) Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812033879/lh5505sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812033879/lh5505Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812033879/lh5505Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H13NO2SF(000) = 568
Mr = 271.32Dx = 1.351 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 864 reflections
a = 4.8728 (10) Åθ = 2.5–28.8°
b = 11.711 (3) ŵ = 0.24 mm1
c = 23.378 (6) ÅT = 296 K
V = 1334.1 (6) Å3Prism, light-yellow
Z = 40.33 × 0.23 × 0.21 mm
Bruker SMART APEXII CCD diffractometer2239 independent reflections
Radiation source: fine-focus sealed tube1207 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.073
ω scansθmax = 25.0°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −3→5
Tmin = 0.925, Tmax = 0.952k = −9→13
4083 measured reflectionsl = −27→19
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.068H-atom parameters constrained
wR(F2) = 0.144w = 1/[σ2(Fo2) + (0.0413P)2] where P = (Fo2 + 2Fc2)/3
S = 0.99(Δ/σ)max < 0.001
2239 reflectionsΔρmax = 0.19 e Å3
173 parametersΔρmin = −0.30 e Å3
0 restraintsAbsolute structure: Flack (1983), 874 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.1 (2)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.2770 (11)0.2177 (4)0.2096 (3)0.0485 (16)
C21.4128 (13)0.1882 (5)0.1606 (3)0.0647 (19)
H21.37250.11960.14230.078*
C31.6064 (14)0.2590 (6)0.1386 (3)0.073 (2)
H31.69700.23970.10490.087*
C41.6692 (13)0.3614 (6)0.1667 (3)0.0670 (18)
H41.80300.40930.15160.080*
C51.5378 (14)0.3923 (5)0.2160 (3)0.0599 (17)
H51.58160.46060.23420.072*
C61.3392 (11)0.3211 (5)0.2386 (3)0.0458 (15)
N11.1883 (9)0.3431 (4)0.2872 (2)0.0468 (12)
C80.8322 (12)0.2602 (5)0.3462 (3)0.0509 (16)
C90.8043 (12)0.3576 (5)0.3797 (3)0.0530 (16)
C100.6091 (12)0.3608 (6)0.4232 (3)0.0603 (17)
C110.4481 (14)0.2664 (6)0.4350 (3)0.0664 (19)
H110.32180.26850.46480.080*
C120.4756 (15)0.1698 (6)0.4026 (3)0.0686 (18)
H120.36610.10670.41050.082*
C130.6598 (12)0.1642 (5)0.3590 (3)0.0568 (16)
H130.67400.09790.33730.068*
C140.3939 (15)0.4754 (6)0.4949 (3)0.084 (2)
H14A0.41620.41850.52460.101*
H14B0.21330.46630.47800.101*
C150.4237 (18)0.5927 (7)0.5194 (3)0.118 (3)
H15A0.61440.60880.52570.176*
H15B0.32650.59700.55510.176*
H15C0.34920.64760.49320.176*
C71.0189 (12)0.2585 (4)0.2991 (2)0.0472 (15)
O10.9557 (8)0.4529 (3)0.37058 (16)0.0633 (12)
H11.05950.43170.34170.095*
O20.5994 (9)0.4617 (4)0.45248 (18)0.0741 (13)
S11.0285 (3)0.14638 (12)0.24914 (8)0.0574 (5)
U11U22U33U12U13U23
C10.039 (4)0.049 (4)0.057 (4)0.007 (3)−0.008 (3)0.004 (3)
C20.064 (5)0.063 (4)0.067 (5)0.008 (4)−0.006 (4)−0.003 (4)
C30.065 (5)0.088 (6)0.064 (5)0.004 (4)0.007 (4)0.009 (5)
C40.064 (4)0.063 (5)0.074 (5)−0.013 (4)−0.008 (4)0.019 (4)
C50.066 (5)0.048 (4)0.066 (4)−0.001 (4)−0.012 (4)0.003 (4)
C60.038 (3)0.036 (3)0.063 (5)0.005 (3)−0.005 (3)0.009 (3)
N10.040 (3)0.036 (3)0.064 (3)−0.001 (3)−0.010 (3)0.001 (3)
C80.043 (4)0.045 (4)0.065 (4)0.001 (3)−0.010 (3)0.008 (4)
C90.043 (4)0.049 (4)0.067 (5)0.005 (3)−0.006 (3)0.018 (4)
C100.055 (4)0.066 (4)0.060 (4)0.005 (4)−0.006 (3)−0.001 (4)
C110.055 (5)0.076 (5)0.068 (5)−0.005 (4)0.002 (4)0.010 (4)
C120.063 (4)0.065 (5)0.078 (5)−0.011 (4)−0.004 (4)0.019 (4)
C130.057 (4)0.041 (4)0.072 (5)−0.006 (4)−0.008 (4)0.008 (4)
C140.083 (6)0.105 (6)0.063 (5)0.004 (5)0.014 (4)−0.007 (5)
C150.142 (8)0.116 (7)0.095 (6)0.016 (6)0.027 (6)−0.035 (5)
C70.046 (4)0.038 (3)0.057 (4)0.008 (3)−0.015 (3)0.000 (3)
O10.066 (3)0.045 (2)0.078 (3)0.000 (2)0.011 (2)−0.004 (2)
O20.073 (3)0.077 (3)0.072 (3)−0.004 (3)0.015 (3)−0.007 (3)
S10.0528 (9)0.0410 (7)0.0784 (11)−0.0014 (8)−0.0047 (10)−0.0030 (10)
C1—C21.368 (8)C9—C101.393 (7)
C1—C61.421 (7)C10—O21.366 (7)
C1—S11.737 (6)C10—C111.384 (8)
C2—C31.358 (8)C11—C121.368 (8)
C2—H20.9300C11—H110.9300
C3—C41.402 (8)C12—C131.360 (8)
C3—H30.9300C12—H120.9300
C4—C51.368 (8)C13—H130.9300
C4—H40.9300C14—O21.418 (7)
C5—C61.382 (7)C14—C151.496 (9)
C5—H50.9300C14—H14A0.9700
C6—N11.377 (7)C14—H14B0.9700
N1—C71.318 (6)C15—H15A0.9600
C8—C91.391 (8)C15—H15B0.9600
C8—C71.428 (7)C15—H15C0.9600
C8—C131.435 (8)C7—S11.758 (5)
C9—O11.355 (6)O1—H10.8797
C2—C1—C6120.8 (6)C12—C11—C10119.7 (6)
C2—C1—S1131.4 (5)C12—C11—H11120.2
C6—C1—S1107.7 (4)C10—C11—H11120.2
C3—C2—C1120.0 (6)C13—C12—C11121.3 (6)
C3—C2—H2120.0C13—C12—H12119.3
C1—C2—H2120.0C11—C12—H12119.3
C2—C3—C4119.7 (6)C12—C13—C8120.3 (6)
C2—C3—H3120.1C12—C13—H13119.8
C4—C3—H3120.1C8—C13—H13119.8
C5—C4—C3121.4 (6)O2—C14—C15107.7 (6)
C5—C4—H4119.3O2—C14—H14A110.2
C3—C4—H4119.3C15—C14—H14A110.2
C4—C5—C6119.4 (6)O2—C14—H14B110.2
C4—C5—H5120.3C15—C14—H14B110.2
C6—C5—H5120.3H14A—C14—H14B108.5
N1—C6—C5125.2 (6)C14—C15—H15A109.5
N1—C6—C1116.0 (5)C14—C15—H15B109.5
C5—C6—C1118.7 (5)H15A—C15—H15B109.5
C7—N1—C6111.6 (5)C14—C15—H15C109.5
C9—C8—C7120.5 (5)H15A—C15—H15C109.5
C9—C8—C13117.9 (6)H15B—C15—H15C109.5
C7—C8—C13121.5 (6)N1—C7—C8123.4 (5)
O1—C9—C8122.2 (5)N1—C7—S1113.9 (4)
O1—C9—C10117.7 (6)C8—C7—S1122.6 (5)
C8—C9—C10120.0 (6)C9—O1—H1101.7
O2—C10—C11124.9 (6)C10—O2—C14118.2 (5)
O2—C10—C9114.3 (6)C1—S1—C790.7 (3)
C11—C10—C9120.7 (6)
C6—C1—C2—C3−1.2 (8)C8—C9—C10—C112.3 (9)
S1—C1—C2—C3−178.3 (5)O2—C10—C11—C12179.8 (6)
C1—C2—C3—C41.0 (9)C9—C10—C11—C12−1.8 (9)
C2—C3—C4—C5−0.5 (10)C10—C11—C12—C130.4 (10)
C3—C4—C5—C60.1 (9)C11—C12—C13—C80.5 (10)
C4—C5—C6—N1−178.7 (5)C9—C8—C13—C120.1 (9)
C4—C5—C6—C1−0.3 (8)C7—C8—C13—C12−177.2 (6)
C2—C1—C6—N1179.4 (5)C6—N1—C7—C8−178.1 (5)
S1—C1—C6—N1−2.9 (6)C6—N1—C7—S1−1.6 (6)
C2—C1—C6—C50.8 (8)C9—C8—C7—N15.5 (8)
S1—C1—C6—C5178.6 (4)C13—C8—C7—N1−177.3 (5)
C5—C6—N1—C7−178.6 (5)C9—C8—C7—S1−170.7 (4)
C1—C6—N1—C73.0 (6)C13—C8—C7—S16.6 (8)
C7—C8—C9—O1−1.9 (8)C11—C10—O2—C14−5.8 (9)
C13—C8—C9—O1−179.3 (5)C9—C10—O2—C14175.7 (5)
C7—C8—C9—C10175.9 (5)C15—C14—O2—C10−178.9 (6)
C13—C8—C9—C10−1.5 (8)C2—C1—S1—C7179.0 (6)
O1—C9—C10—O2−1.2 (8)C6—C1—S1—C71.5 (4)
C8—C9—C10—O2−179.1 (5)N1—C7—S1—C10.0 (4)
O1—C9—C10—C11−179.8 (5)C8—C7—S1—C1176.5 (5)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.881.762.592 (6)158
C2—H2···O1i0.932.553.372 (8)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯N10.881.762.592 (6)158
C2—H2⋯O1i 0.932.553.372 (8)148

Symmetry code: (i) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  5,5'-Bis(diethyl-amino)-2,2'-[2,2-di-methyl-propane-1,3-diylbis-(nitrilo-methylidyne)]diphenol.

Authors:  Reza Kia; Hadi Kargar; Muhammad Nawaz Tahir; Fatemeh Kianoosh
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-11

3.  4,4'-Dimeth-oxy-2,2'-[2,2-dimethyl-propane-1,3-diylbis(nitrilo-methanylyl-idene)]diphenol.

Authors:  Hadi Kargar; Reza Kia; Elham Pahlavani; Muhammad Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-12

4.  2-(1,3-Benzothia-zol-2-yl)-6-eth-oxy-phenol.

Authors:  D Lakshmanan; R Madhan Raj; R Selvakumar; M Bakthadoss; S Murugavel
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-06

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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