Literature DB >> 22969523

5-Hy-droxy-2-{(E)-[(3-nitro-phen-yl)iminio]meth-yl}phenolate.

Muhammad Ashraf Shaheen, M Nawaz Tahir, Rana Muhammad Irfan, Shahid Iqbal, Saeed Ahmad.   

Abstract

The title compound, C(13)H(10)N(2)O(4), crystallized as the zwitterionic tautomer. As a result, the phenolate C-O(-) bond [1.296 (2) Å] is shorter than a normal Csp(2)-O(H) bond, and the azomethine C=N bond [1.314 (2) Å] is longer than a normal C=N double bond. The mol-ecule is nearly planar, the mean plane of the nitro-substituted benzene ring forming dihedral angles of 9.83 (7) and 8.45 (9)° with the other benzene ring and with the nitro group, respectively. The mol-ecular conformation is stabilized by an intra-molecular N-H⋯O hydrogen bond. In the crystal, strong O-H⋯O hydrogen bonds link the mol-ecules into double-stranded chains along the b-axis direction. Within the chains there are π-π interactions involving the benzene rings of adjacent molecules [centroid-centroid distance = 3.669 (1) Å]. The chains are linked via C-H⋯O hydrogen bonds, forming R(2) (1)(6), R(2) (1)(7) and R(2) (2)(10) ring motifs.

Entities:  

Year:  2012        PMID: 22969523      PMCID: PMC3435650          DOI: 10.1107/S1600536812033740

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Yeap et al. (1992 ▶); Hijji et al. (2009 ▶). For graph-set analysis of hydrogen bonds, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C13H10N2O4 M = 258.23 Monoclinic, a = 12.8518 (9) Å b = 7.8501 (5) Å c = 24.1316 (18) Å β = 101.593 (3)° V = 2384.9 (3) Å3 Z = 8 Mo Kα radiation μ = 0.11 mm−1 T = 296 K 0.30 × 0.25 × 0.22 mm

Data collection

Bruker Kappa APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.975, T max = 0.985 5601 measured reflections 2126 independent reflections 1569 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.105 S = 1.02 2126 reflections 173 parameters H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.15 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812033740/yk2068sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812033740/yk2068Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812033740/yk2068Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H10N2O4F(000) = 1072
Mr = 258.23Dx = 1.438 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 1569 reflections
a = 12.8518 (9) Åθ = 3.1–25.3°
b = 7.8501 (5) ŵ = 0.11 mm1
c = 24.1316 (18) ÅT = 296 K
β = 101.593 (3)°Prism, orange
V = 2384.9 (3) Å30.30 × 0.25 × 0.22 mm
Z = 8
Bruker Kappa APEXII CCD area-detector diffractometer2126 independent reflections
Radiation source: fine-focus sealed tube1569 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.025
Detector resolution: 8.10 pixels mm-1θmax = 25.3°, θmin = 3.1°
ω scansh = −15→15
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −9→8
Tmin = 0.975, Tmax = 0.985l = −28→27
5601 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0478P)2 + 0.8634P] where P = (Fo2 + 2Fc2)/3
2126 reflections(Δ/σ)max < 0.001
173 parametersΔρmax = 0.13 e Å3
0 restraintsΔρmin = −0.15 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.15456 (11)−0.19142 (18)0.02818 (6)0.0662 (5)
O20.20746 (12)0.03661 (18)−0.00681 (6)0.0724 (6)
O30.62612 (10)0.43187 (15)0.22353 (5)0.0534 (4)
O40.76284 (11)0.95669 (16)0.17361 (5)0.0575 (5)
N10.21457 (12)−0.0694 (2)0.03061 (7)0.0496 (6)
N20.49661 (11)0.26941 (19)0.14644 (6)0.0474 (5)
C10.43511 (13)0.1203 (2)0.13474 (7)0.0410 (6)
C20.35653 (14)0.1006 (2)0.08681 (7)0.0421 (6)
C30.29944 (13)−0.0494 (2)0.08125 (7)0.0414 (6)
C40.31558 (15)−0.1781 (2)0.12040 (8)0.0481 (6)
C50.39528 (16)−0.1569 (3)0.16724 (8)0.0530 (7)
C60.45478 (14)−0.0106 (3)0.17409 (7)0.0487 (6)
C70.50024 (13)0.4025 (2)0.11385 (7)0.0447 (6)
C80.56478 (13)0.5432 (2)0.13102 (7)0.0405 (6)
C90.62972 (13)0.5521 (2)0.18714 (7)0.0403 (6)
C100.69554 (13)0.6942 (2)0.20049 (7)0.0406 (6)
C110.69865 (13)0.8209 (2)0.16195 (7)0.0416 (6)
C120.63360 (14)0.8146 (2)0.10705 (7)0.0461 (6)
C130.56882 (14)0.6792 (2)0.09292 (7)0.0459 (6)
H20.342680.185280.059360.0505*
H2A0.537310.273960.179380.0569*
H40.27414−0.276110.115470.0578*
H4A0.797250.949120.206040.0862*
H50.40893−0.242230.194460.0636*
H60.509280.001110.205660.0584*
H70.457870.402800.077740.0536*
H100.738190.702760.236400.0487*
H120.635510.902010.081260.0553*
H130.525550.675180.057080.0551*
U11U22U33U12U13U23
O10.0630 (9)0.0603 (9)0.0709 (10)−0.0201 (8)0.0033 (7)−0.0121 (7)
O20.0882 (12)0.0606 (9)0.0540 (9)−0.0102 (8)−0.0198 (8)0.0103 (8)
O30.0592 (8)0.0484 (7)0.0437 (8)−0.0070 (6)−0.0110 (6)0.0081 (6)
O40.0692 (9)0.0485 (8)0.0460 (8)−0.0139 (7)−0.0092 (6)0.0048 (6)
N10.0527 (10)0.0446 (9)0.0478 (10)−0.0009 (8)0.0010 (7)−0.0077 (8)
N20.0451 (9)0.0506 (9)0.0399 (9)−0.0003 (8)−0.0072 (6)−0.0014 (7)
C10.0396 (10)0.0429 (10)0.0386 (10)0.0018 (8)0.0037 (7)−0.0030 (8)
C20.0469 (10)0.0370 (10)0.0389 (10)0.0026 (8)0.0002 (8)0.0031 (7)
C30.0418 (10)0.0400 (10)0.0401 (10)0.0022 (8)0.0031 (8)−0.0036 (8)
C40.0514 (11)0.0426 (10)0.0510 (11)0.0008 (9)0.0117 (9)0.0057 (9)
C50.0567 (12)0.0538 (12)0.0484 (12)0.0081 (10)0.0103 (9)0.0167 (9)
C60.0469 (11)0.0619 (12)0.0347 (10)0.0056 (10)0.0023 (8)0.0053 (9)
C70.0391 (10)0.0532 (11)0.0374 (10)0.0041 (9)−0.0025 (8)−0.0024 (9)
C80.0368 (9)0.0432 (10)0.0378 (10)0.0029 (8)−0.0016 (7)−0.0044 (8)
C90.0391 (10)0.0399 (10)0.0385 (10)0.0062 (8)−0.0002 (7)0.0001 (8)
C100.0414 (10)0.0429 (10)0.0318 (9)0.0022 (8)−0.0059 (7)−0.0033 (8)
C110.0429 (10)0.0391 (10)0.0403 (10)0.0018 (8)0.0024 (8)−0.0024 (8)
C120.0514 (11)0.0479 (11)0.0356 (10)0.0027 (9)0.0007 (8)0.0050 (8)
C130.0462 (11)0.0528 (11)0.0337 (10)0.0048 (9)−0.0040 (8)0.0004 (8)
O1—N11.224 (2)C7—C81.393 (2)
O2—N11.218 (2)C8—C131.417 (2)
O3—C91.296 (2)C8—C91.443 (2)
O4—C111.343 (2)C9—C101.398 (2)
O4—H4A0.8200C10—C111.368 (2)
N1—C31.474 (2)C11—C121.418 (2)
N2—C71.314 (2)C12—C131.351 (2)
N2—C11.409 (2)C2—H20.9300
N2—H2A0.8600C4—H40.9300
C1—C61.388 (3)C5—H50.9300
C1—C21.383 (2)C6—H60.9300
C2—C31.380 (2)C7—H70.9300
C3—C41.370 (2)C10—H100.9300
C4—C51.375 (3)C12—H120.9300
C5—C61.371 (3)C13—H130.9300
C11—O4—H4A109.00C8—C9—C10117.65 (14)
O1—N1—O2123.14 (17)C9—C10—C11121.51 (15)
O1—N1—C3118.52 (15)O4—C11—C12116.45 (14)
O2—N1—C3118.35 (15)O4—C11—C10122.38 (15)
C1—N2—C7128.80 (15)C10—C11—C12121.17 (15)
C7—N2—H2A116.00C11—C12—C13118.74 (15)
C1—N2—H2A116.00C8—C13—C12122.02 (16)
N2—C1—C2123.13 (15)C1—C2—H2121.00
N2—C1—C6117.42 (15)C3—C2—H2121.00
C2—C1—C6119.45 (16)C3—C4—H4121.00
C1—C2—C3117.49 (15)C5—C4—H4121.00
N1—C3—C2117.52 (14)C4—C5—H5120.00
N1—C3—C4118.52 (15)C6—C5—H5120.00
C2—C3—C4123.95 (16)C1—C6—H6119.00
C3—C4—C5117.53 (17)C5—C6—H6119.00
C4—C5—C6120.39 (19)N2—C7—H7119.00
C1—C6—C5121.15 (16)C8—C7—H7119.00
N2—C7—C8122.88 (15)C9—C10—H10119.00
C7—C8—C13120.11 (15)C11—C10—H10119.00
C7—C8—C9121.00 (15)C11—C12—H12121.00
C9—C8—C13118.88 (15)C13—C12—H12121.00
O3—C9—C8120.53 (14)C8—C13—H13119.00
O3—C9—C10121.82 (15)C12—C13—H13119.00
O1—N1—C3—C2−171.10 (16)C4—C5—C6—C11.1 (3)
O1—N1—C3—C47.6 (2)N2—C7—C8—C9−1.9 (3)
O2—N1—C3—C28.8 (2)N2—C7—C8—C13177.02 (16)
O2—N1—C3—C4−172.56 (17)C7—C8—C9—O3−2.7 (3)
C7—N2—C1—C2−8.0 (3)C7—C8—C9—C10177.49 (16)
C7—N2—C1—C6172.80 (17)C13—C8—C9—O3178.36 (16)
C1—N2—C7—C8179.59 (16)C13—C8—C9—C10−1.5 (2)
N2—C1—C2—C3−177.80 (16)C7—C8—C13—C12−177.19 (17)
C6—C1—C2—C31.4 (3)C9—C8—C13—C121.8 (3)
N2—C1—C6—C5177.00 (17)O3—C9—C10—C11−179.76 (16)
C2—C1—C6—C5−2.2 (3)C8—C9—C10—C110.1 (2)
C1—C2—C3—N1179.08 (15)C9—C10—C11—O4−178.67 (16)
C1—C2—C3—C40.5 (3)C9—C10—C11—C121.1 (3)
N1—C3—C4—C5179.88 (17)O4—C11—C12—C13178.96 (16)
C2—C3—C4—C5−1.6 (3)C10—C11—C12—C13−0.9 (3)
C3—C4—C5—C60.7 (3)C11—C12—C13—C8−0.6 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O30.861.872.5716 (19)138
O4—H4A···O3i0.821.792.6100 (17)179
C2—H2···O2ii0.932.543.446 (2)164
C4—H4···O4iii0.932.543.268 (2)135
C7—H7···O2ii0.932.493.355 (2)154
C10—H10···O3i0.932.563.226 (2)129
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2A⋯O30.861.872.5716 (19)138
O4—H4A⋯O3i 0.821.792.6100 (17)179
C2—H2⋯O2ii 0.932.543.446 (2)164
C4—H4⋯O4iii 0.932.543.268 (2)135
C7—H7⋯O2ii 0.932.493.355 (2)154
C10—H10⋯O3i 0.932.563.226 (2)129

Symmetry codes: (i) ; (ii) ; (iii) .

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