| Literature DB >> 22969518 |
Sana Aslam, Hamid Latif Siddiqui, Matloob Ahmad, Muhammad Zia-Ur-Rehman, Masood Parvez.
Abstract
In the title mol-ecule, C(16)H(13)N(3)O(2)S, the heterocyclic thia-zine ring adopts a twist chair conformation with the S atom and an adjacent C atom displaced by 0.946 (5) and 0.405 (6) Å, respectively, on the same side of the mean plane formed by the remaining ring atoms. The mean planes of the benzene rings make dihedral angles of 16.61 (10) and 15.32 (10)° with the mean plane of the pyrazole ring. The mol-ecular structure is consolidated by intra-molecular C-H⋯N inter-actions and the crystal packing is stabilized by N-H⋯O and C-H⋯N hydrogen bonds. The crystal studied was an inversion twin with the refined ratio of the twin components being 0.53 (11):0.47 (11).Entities:
Year: 2012 PMID: 22969518 PMCID: PMC3435645 DOI: 10.1107/S1600536812033284
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H13N3O2S | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 1837 reflections |
| θ = 1.0–27.5° | |
| µ = 0.24 mm−1 | |
| Prism, colourless | |
| 0.20 × 0.10 × 0.06 mm |
| Nonius KappaCCD diffractometer | 3037 independent reflections |
| Radiation source: fine-focus sealed tube | 2798 reflections with |
| Graphite monochromator | |
| ω and φ scans | θmax = 27.5°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 8451 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3037 reflections | Δρmax = 0.20 e Å−3 |
| 201 parameters | Δρmin = −0.24 e Å−3 |
| 1 restraint | Absolute structure: racemic twin; used 1306 unmerged Friedel pairs (Flack, 1983) |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.53 (11) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.68932 (5) | −0.05378 (4) | 0.08389 (12) | 0.03515 (17) | |
| O1 | 0.57190 (16) | −0.05177 (14) | 0.1024 (4) | 0.0499 (6) | |
| O2 | 0.73666 (18) | −0.03884 (14) | −0.0982 (3) | 0.0431 (5) | |
| N1 | 0.74275 (18) | 0.01482 (14) | 0.2279 (4) | 0.0337 (5) | |
| N2 | 1.03707 (18) | 0.01490 (15) | 0.2736 (4) | 0.0382 (6) | |
| H2N | 1.1019 | 0.0358 | 0.2852 | 0.046* | |
| N3 | 1.0195 (2) | −0.06632 (14) | 0.2734 (4) | 0.0390 (6) | |
| C1 | 0.7415 (2) | −0.14793 (18) | 0.1673 (4) | 0.0358 (6) | |
| C2 | 0.6783 (3) | −0.2185 (2) | 0.1532 (5) | 0.0440 (8) | |
| H2 | 0.6065 | −0.2164 | 0.1068 | 0.053* | |
| C3 | 0.7239 (3) | −0.2915 (2) | 0.2091 (5) | 0.0495 (8) | |
| H3 | 0.6826 | −0.3392 | 0.1997 | 0.059* | |
| C4 | 0.8309 (3) | −0.29478 (19) | 0.2793 (5) | 0.0478 (8) | |
| H4 | 0.8610 | −0.3447 | 0.3148 | 0.057* | |
| C5 | 0.8928 (3) | −0.22450 (18) | 0.2968 (5) | 0.0408 (7) | |
| H5 | 0.9637 | −0.2271 | 0.3471 | 0.049* | |
| C6 | 0.8497 (2) | −0.14990 (17) | 0.2397 (4) | 0.0332 (6) | |
| C7 | 0.9096 (2) | −0.07256 (17) | 0.2537 (4) | 0.0327 (6) | |
| C8 | 0.8602 (2) | 0.00418 (16) | 0.2414 (4) | 0.0307 (6) | |
| C9 | 0.9449 (2) | 0.06124 (16) | 0.2543 (4) | 0.0324 (6) | |
| C10 | 0.6875 (3) | 0.0225 (2) | 0.4135 (5) | 0.0475 (8) | |
| H10A | 0.7147 | 0.0700 | 0.4774 | 0.057* | |
| H10B | 0.7027 | −0.0251 | 0.4880 | 0.057* | |
| H10C | 0.6092 | 0.0275 | 0.3953 | 0.057* | |
| C11 | 0.9476 (2) | 0.15030 (17) | 0.2437 (4) | 0.0330 (6) | |
| C12 | 1.0427 (3) | 0.19349 (18) | 0.2942 (5) | 0.0399 (7) | |
| H12 | 1.1040 | 0.1658 | 0.3404 | 0.048* | |
| C13 | 1.0454 (3) | 0.2779 (2) | 0.2753 (5) | 0.0473 (8) | |
| H13 | 1.1087 | 0.3064 | 0.3095 | 0.057* | |
| C14 | 0.9552 (3) | 0.31974 (19) | 0.2063 (5) | 0.0466 (8) | |
| H14 | 0.9577 | 0.3762 | 0.1935 | 0.056* | |
| C15 | 0.8613 (3) | 0.2772 (2) | 0.1563 (5) | 0.0463 (8) | |
| H15 | 0.8002 | 0.3051 | 0.1099 | 0.056* | |
| C16 | 0.8575 (3) | 0.19346 (19) | 0.1748 (5) | 0.0405 (7) | |
| H16 | 0.7937 | 0.1655 | 0.1407 | 0.049* |
| S1 | 0.0238 (3) | 0.0454 (4) | 0.0363 (3) | −0.0041 (3) | −0.0014 (3) | 0.0004 (4) |
| O1 | 0.0255 (9) | 0.0642 (14) | 0.0602 (16) | −0.0059 (9) | −0.0010 (12) | −0.0025 (13) |
| O2 | 0.0328 (11) | 0.0613 (14) | 0.0351 (12) | −0.0066 (10) | −0.0014 (9) | 0.0053 (11) |
| N1 | 0.0255 (11) | 0.0361 (12) | 0.0394 (13) | 0.0005 (9) | 0.0004 (10) | −0.0021 (11) |
| N2 | 0.0275 (11) | 0.0361 (12) | 0.0511 (16) | −0.0026 (10) | −0.0064 (11) | 0.0006 (12) |
| N3 | 0.0299 (12) | 0.0363 (12) | 0.0508 (16) | 0.0026 (9) | −0.0067 (12) | −0.0013 (12) |
| C1 | 0.0328 (14) | 0.0401 (16) | 0.0343 (15) | −0.0047 (12) | 0.0035 (12) | −0.0021 (13) |
| C2 | 0.0412 (17) | 0.0538 (19) | 0.0370 (16) | −0.0166 (14) | 0.0052 (14) | −0.0069 (15) |
| C3 | 0.060 (2) | 0.0394 (17) | 0.049 (2) | −0.0164 (15) | 0.0029 (17) | −0.0051 (15) |
| C4 | 0.062 (2) | 0.0345 (15) | 0.0468 (19) | −0.0032 (14) | 0.0076 (17) | −0.0014 (14) |
| C5 | 0.0442 (16) | 0.0382 (16) | 0.0399 (17) | 0.0011 (13) | 0.0043 (14) | 0.0002 (13) |
| C6 | 0.0334 (13) | 0.0364 (14) | 0.0298 (14) | −0.0009 (11) | 0.0019 (12) | −0.0022 (12) |
| C7 | 0.0282 (13) | 0.0352 (13) | 0.0348 (15) | −0.0003 (11) | −0.0022 (12) | −0.0015 (12) |
| C8 | 0.0247 (12) | 0.0365 (14) | 0.0310 (14) | −0.0012 (10) | −0.0027 (11) | −0.0007 (12) |
| C9 | 0.0285 (13) | 0.0369 (14) | 0.0320 (14) | −0.0004 (10) | −0.0045 (12) | −0.0029 (13) |
| C10 | 0.0391 (18) | 0.0520 (19) | 0.051 (2) | 0.0004 (14) | 0.0098 (15) | −0.0118 (16) |
| C11 | 0.0320 (13) | 0.0386 (14) | 0.0283 (14) | −0.0022 (11) | 0.0004 (11) | −0.0007 (12) |
| C12 | 0.0375 (15) | 0.0390 (15) | 0.0433 (18) | −0.0030 (12) | −0.0069 (14) | 0.0004 (14) |
| C13 | 0.0493 (18) | 0.0417 (16) | 0.051 (2) | −0.0117 (14) | −0.0067 (16) | −0.0053 (16) |
| C14 | 0.061 (2) | 0.0300 (14) | 0.049 (2) | −0.0025 (14) | 0.0047 (16) | −0.0004 (13) |
| C15 | 0.0499 (19) | 0.0404 (16) | 0.0487 (19) | 0.0091 (14) | −0.0037 (16) | 0.0025 (15) |
| C16 | 0.0379 (15) | 0.0398 (15) | 0.0439 (18) | 0.0005 (12) | −0.0069 (14) | −0.0015 (14) |
| S1—O1 | 1.428 (2) | C5—H5 | 0.9300 |
| S1—O2 | 1.435 (2) | C6—C7 | 1.464 (4) |
| S1—N1 | 1.651 (3) | C7—C8 | 1.395 (4) |
| S1—C1 | 1.770 (3) | C8—C9 | 1.390 (4) |
| N1—C8 | 1.436 (3) | C9—C11 | 1.462 (4) |
| N1—C10 | 1.483 (4) | C10—H10A | 0.9600 |
| N2—N3 | 1.348 (3) | C10—H10B | 0.9600 |
| N2—C9 | 1.356 (3) | C10—H10C | 0.9600 |
| N2—H2N | 0.8600 | C11—C16 | 1.388 (4) |
| N3—C7 | 1.342 (3) | C11—C12 | 1.398 (4) |
| C1—C2 | 1.391 (4) | C12—C13 | 1.390 (4) |
| C1—C6 | 1.406 (4) | C12—H12 | 0.9300 |
| C2—C3 | 1.377 (5) | C13—C14 | 1.379 (5) |
| C2—H2 | 0.9300 | C13—H13 | 0.9300 |
| C3—C4 | 1.389 (5) | C14—C15 | 1.380 (5) |
| C3—H3 | 0.9300 | C14—H14 | 0.9300 |
| C4—C5 | 1.380 (4) | C15—C16 | 1.379 (4) |
| C4—H4 | 0.9300 | C15—H15 | 0.9300 |
| C5—C6 | 1.390 (4) | C16—H16 | 0.9300 |
| O1—S1—O2 | 118.47 (16) | N3—C7—C6 | 124.3 (2) |
| O1—S1—N1 | 108.48 (14) | C8—C7—C6 | 124.4 (2) |
| O2—S1—N1 | 106.54 (13) | C9—C8—C7 | 106.7 (2) |
| O1—S1—C1 | 110.17 (14) | C9—C8—N1 | 130.7 (2) |
| O2—S1—C1 | 107.91 (14) | C7—C8—N1 | 122.5 (2) |
| N1—S1—C1 | 104.31 (14) | N2—C9—C8 | 103.6 (2) |
| C8—N1—C10 | 113.4 (3) | N2—C9—C11 | 123.1 (2) |
| C8—N1—S1 | 110.27 (19) | C8—C9—C11 | 133.2 (2) |
| C10—N1—S1 | 115.5 (2) | N1—C10—H10A | 109.5 |
| N3—N2—C9 | 115.1 (2) | N1—C10—H10B | 109.5 |
| N3—N2—H2N | 122.5 | H10A—C10—H10B | 109.5 |
| C9—N2—H2N | 122.5 | N1—C10—H10C | 109.5 |
| C7—N3—N2 | 103.4 (2) | H10A—C10—H10C | 109.5 |
| C2—C1—C6 | 121.3 (3) | H10B—C10—H10C | 109.5 |
| C2—C1—S1 | 120.3 (2) | C16—C11—C12 | 118.6 (3) |
| C6—C1—S1 | 118.3 (2) | C16—C11—C9 | 120.6 (3) |
| C3—C2—C1 | 118.8 (3) | C12—C11—C9 | 120.7 (3) |
| C3—C2—H2 | 120.6 | C13—C12—C11 | 119.9 (3) |
| C1—C2—H2 | 120.6 | C13—C12—H12 | 120.0 |
| C2—C3—C4 | 120.7 (3) | C11—C12—H12 | 120.0 |
| C2—C3—H3 | 119.6 | C14—C13—C12 | 120.7 (3) |
| C4—C3—H3 | 119.6 | C14—C13—H13 | 119.6 |
| C5—C4—C3 | 120.4 (3) | C12—C13—H13 | 119.6 |
| C5—C4—H4 | 119.8 | C15—C14—C13 | 119.4 (3) |
| C3—C4—H4 | 119.8 | C15—C14—H14 | 120.3 |
| C4—C5—C6 | 120.3 (3) | C13—C14—H14 | 120.3 |
| C4—C5—H5 | 119.9 | C16—C15—C14 | 120.4 (3) |
| C6—C5—H5 | 119.9 | C16—C15—H15 | 119.8 |
| C5—C6—C1 | 118.4 (3) | C14—C15—H15 | 119.8 |
| C5—C6—C7 | 123.8 (3) | C15—C16—C11 | 120.9 (3) |
| C1—C6—C7 | 117.8 (3) | C15—C16—H16 | 119.5 |
| N3—C7—C8 | 111.2 (2) | C11—C16—H16 | 119.5 |
| O1—S1—N1—C8 | 168.8 (2) | C5—C6—C7—C8 | −163.6 (3) |
| O2—S1—N1—C8 | −62.7 (2) | C1—C6—C7—C8 | 15.2 (4) |
| C1—S1—N1—C8 | 51.3 (2) | N3—C7—C8—C9 | 0.0 (4) |
| O1—S1—N1—C10 | 38.5 (3) | C6—C7—C8—C9 | −177.8 (3) |
| O2—S1—N1—C10 | 167.1 (2) | N3—C7—C8—N1 | −177.3 (3) |
| C1—S1—N1—C10 | −78.9 (2) | C6—C7—C8—N1 | 4.9 (5) |
| C9—N2—N3—C7 | −0.3 (4) | C10—N1—C8—C9 | −86.5 (4) |
| O1—S1—C1—C2 | 30.8 (3) | S1—N1—C8—C9 | 142.1 (3) |
| O2—S1—C1—C2 | −99.9 (3) | C10—N1—C8—C7 | 90.0 (3) |
| N1—S1—C1—C2 | 147.0 (2) | S1—N1—C8—C7 | −41.3 (4) |
| O1—S1—C1—C6 | −152.0 (2) | N3—N2—C9—C8 | 0.3 (4) |
| O2—S1—C1—C6 | 77.3 (3) | N3—N2—C9—C11 | −177.4 (3) |
| N1—S1—C1—C6 | −35.8 (3) | C7—C8—C9—N2 | −0.2 (3) |
| C6—C1—C2—C3 | −0.9 (5) | N1—C8—C9—N2 | 176.8 (3) |
| S1—C1—C2—C3 | 176.2 (3) | C7—C8—C9—C11 | 177.2 (3) |
| C1—C2—C3—C4 | 0.4 (5) | N1—C8—C9—C11 | −5.8 (6) |
| C2—C3—C4—C5 | 1.0 (6) | N2—C9—C11—C16 | 162.7 (3) |
| C3—C4—C5—C6 | −1.7 (5) | C8—C9—C11—C16 | −14.3 (5) |
| C4—C5—C6—C1 | 1.1 (5) | N2—C9—C11—C12 | −14.2 (5) |
| C4—C5—C6—C7 | 179.8 (3) | C8—C9—C11—C12 | 168.7 (3) |
| C2—C1—C6—C5 | 0.2 (4) | C16—C11—C12—C13 | 0.1 (5) |
| S1—C1—C6—C5 | −176.9 (2) | C9—C11—C12—C13 | 177.2 (3) |
| C2—C1—C6—C7 | −178.6 (3) | C11—C12—C13—C14 | −0.3 (6) |
| S1—C1—C6—C7 | 4.2 (4) | C12—C13—C14—C15 | 0.2 (6) |
| N2—N3—C7—C8 | 0.2 (3) | C13—C14—C15—C16 | −0.1 (6) |
| N2—N3—C7—C6 | 178.0 (3) | C14—C15—C16—C11 | 0.0 (5) |
| C5—C6—C7—N3 | 18.9 (5) | C12—C11—C16—C15 | 0.0 (5) |
| C1—C6—C7—N3 | −162.4 (3) | C9—C11—C16—C15 | −177.0 (3) |
| H··· | ||||
| N2—H2 | 0.86 | 2.12 | 2.912 (3) | 152 |
| C3—H3···N3ii | 0.93 | 2.56 | 3.429 (4) | 155 |
| C10—H10 | 0.96 | 2.49 | 2.883 (4) | 104 |
| C16—H16···N1 | 0.93 | 2.62 | 3.263 (4) | 127 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.12 | 2.912 (3) | 152 |
| C3—H3⋯N3ii | 0.93 | 2.56 | 3.429 (4) | 155 |
| C16—H16⋯N1 | 0.93 | 2.62 | 3.263 (4) | 127 |
Symmetry codes: (i) ; (ii) .