Literature DB >> 22969468

{4,4'-Dimethyl-2,2'-[2,2-dimethyl-propane-1,3-diylbis(nitrilo-methanylyl-idene)]diphenolato}copper(II) monohydrate.

Hadi Kargar, Reza Kia, Fatemeh Ganji, Valiollah Mirkhani.   

Abstract

The asymmetric unit of the title compound, [Cu(C(21)H(24)N(2)O(2))]·H(2)O, comprises half of a Schiff base complex and half of a water mol-ecule. The whole compound is generated by crystallographic twofold rotation symmetry. The geometry around the Cu(II) atom, located on a twofold axis, is distorted square-planar, which is supported by the N(2)O(2) donor atoms of the coordinating Schiff base ligand. The dihedral angle between the symmetry-related benzene rings is 47.5 (4)°. In the crystal, the water mol-ecule that is hydrogen bonded to the coordinated O atoms links the mol-ecules via O-H⋯O inter-actions into chains parallel to [001]. The crystal structure is further stabilized by C-H⋯π inter-actions, and by π-π inter-actions involving inversion-related chelate rings [centroid-centroid distance = 3.480 (4) Å].

Entities:  

Year:  2012        PMID: 22969468      PMCID: PMC3435595          DOI: 10.1107/S1600536812034502

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of Schiff bases in coordination chemistry, see: Granovski et al. (1993 ▶); Blower (1998 ▶). For related structures, see: Ghaemi et al. (2011 ▶); Kargar et al. (2011 ▶, 2012 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[Cu(C21H24N2O2)]·H2O M = 417.98 Monoclinic, a = 13.353 (5) Å b = 15.986 (5) Å c = 10.023 (5) Å β = 104.696 (5)° V = 2069.5 (14) Å3 Z = 4 Mo Kα radiation μ = 1.08 mm−1 T = 296 K 0.11 × 0.08 × 0.05 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.891, T max = 0.948 4967 measured reflections 1779 independent reflections 1053 reflections with I > 2σ(I) R int = 0.101

Refinement

R[F 2 > 2σ(F 2)] = 0.084 wR(F 2) = 0.209 S = 0.95 1779 reflections 125 parameters H-atom parameters constrained Δρmax = 1.03 e Å−3 Δρmin = −0.96 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812034502/su2488sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812034502/su2488Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C21H24N2O2)]·H2OF(000) = 876
Mr = 417.98Dx = 1.342 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 512 reflections
a = 13.353 (5) Åθ = 2.5–27.4°
b = 15.986 (5) ŵ = 1.08 mm1
c = 10.023 (5) ÅT = 296 K
β = 104.696 (5)°Block, dark-green
V = 2069.5 (14) Å30.11 × 0.08 × 0.05 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer1779 independent reflections
Radiation source: fine-focus sealed tube1053 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.101
φ and ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −15→11
Tmin = 0.891, Tmax = 0.948k = −18→18
4967 measured reflectionsl = −10→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.084Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.209H-atom parameters constrained
S = 0.95w = 1/[σ2(Fo2) + (0.0775P)2] where P = (Fo2 + 2Fc2)/3
1779 reflections(Δ/σ)max < 0.001
125 parametersΔρmax = 1.03 e Å3
0 restraintsΔρmin = −0.96 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.01026 (6)−0.25000.0266 (5)
O10.4089 (4)−0.0737 (2)−0.3499 (6)0.0312 (14)
N10.4554 (5)0.0944 (3)−0.3912 (7)0.0305 (16)
C10.3331 (6)−0.0612 (4)−0.4620 (9)0.0293 (19)
C20.2617 (6)−0.1276 (4)−0.5073 (10)0.042 (3)
H20.2662−0.1758−0.45410.050*
C30.1860 (7)−0.1214 (5)−0.6291 (11)0.046 (3)
H30.1375−0.1642−0.65300.055*
C40.1790 (6)−0.0526 (5)−0.7191 (10)0.045 (2)
C60.3222 (6)0.0109 (4)−0.5441 (9)0.0311 (19)
C70.3854 (6)0.0845 (4)−0.5067 (10)0.032 (2)
H70.37530.1282−0.56990.038*
C80.5166 (6)0.1727 (4)−0.3691 (9)0.036 (2)
H8A0.49840.2056−0.45310.043*
H8B0.58940.1587−0.35120.043*
C90.50000.2260 (6)−0.25000.048 (4)
C50.2449 (6)0.0134 (5)−0.6699 (10)0.042 (2)
H50.23800.0621−0.72240.051*
C110.1004 (8)−0.0471 (7)−0.8564 (12)0.069 (3)
H11B0.1206−0.0042−0.91130.104*
H11A0.0338−0.0338−0.84210.104*
H11C0.0968−0.0999−0.90320.104*
C100.4033 (10)0.2806 (6)−0.2988 (13)0.087 (5)
H10B0.39470.3149−0.22380.130*
H10A0.34360.2455−0.32990.130*
H10C0.41100.3157−0.37330.130*
O1W0.5000−0.2254 (4)−0.25000.091 (5)
H1W10.5281−0.1936−0.29810.137*
U11U22U33U12U13U23
Cu10.0194 (7)0.0263 (6)0.0300 (9)0.000−0.0015 (6)0.000
O10.026 (3)0.026 (2)0.031 (4)−0.0008 (18)−0.012 (3)−0.005 (2)
N10.033 (4)0.032 (3)0.030 (5)−0.005 (2)0.016 (4)0.003 (3)
C10.018 (4)0.038 (4)0.030 (5)0.001 (3)0.003 (4)−0.005 (3)
C20.031 (5)0.037 (4)0.049 (7)0.000 (3)−0.007 (5)0.000 (4)
C30.020 (5)0.060 (5)0.052 (7)−0.007 (3)0.001 (5)−0.014 (5)
C40.017 (4)0.068 (5)0.046 (7)−0.005 (4)−0.003 (5)−0.003 (5)
C60.022 (4)0.036 (3)0.032 (5)0.007 (3)0.001 (4)0.001 (3)
C70.030 (5)0.029 (3)0.036 (6)0.007 (3)0.006 (5)0.011 (3)
C80.026 (5)0.032 (4)0.044 (6)−0.007 (3)−0.002 (5)0.004 (3)
C90.046 (9)0.025 (5)0.073 (12)0.0000.018 (8)0.000
C50.026 (5)0.052 (4)0.043 (6)0.005 (3)−0.002 (4)0.007 (4)
C110.036 (6)0.113 (8)0.049 (8)−0.013 (5)−0.007 (6)0.000 (6)
C100.123 (12)0.058 (6)0.089 (11)0.050 (6)0.045 (9)0.034 (6)
O1W0.106 (10)0.033 (5)0.106 (11)0.000−0.026 (8)0.000
Cu1—O1i1.914 (4)C6—C71.441 (10)
Cu1—O11.914 (4)C7—H70.9300
Cu1—N1i1.934 (6)C8—C91.527 (10)
Cu1—N11.934 (6)C8—H8A0.9700
O1—C11.322 (9)C8—H8B0.9700
N1—C71.300 (10)C9—C8i1.527 (10)
N1—C81.480 (8)C9—C101.533 (10)
C1—C61.403 (10)C9—C10i1.533 (10)
C1—C21.423 (10)C5—H50.9300
C2—C31.377 (12)C11—H11B0.9600
C2—H20.9300C11—H11A0.9600
C3—C41.411 (13)C11—H11C0.9600
C3—H30.9300C10—H10B0.9600
C4—C51.382 (11)C10—H10A0.9600
C4—C111.507 (12)C10—H10C0.9600
C6—C51.413 (11)O1W—H1W10.8513
O1i—Cu1—O191.0 (3)N1—C8—C9113.9 (7)
O1i—Cu1—N1i93.9 (2)N1—C8—H8A108.8
O1—Cu1—N1i155.2 (3)C9—C8—H8A108.8
O1i—Cu1—N1155.1 (3)N1—C8—H8B108.8
O1—Cu1—N193.9 (2)C9—C8—H8B108.8
N1i—Cu1—N191.9 (4)H8A—C8—H8B107.7
C1—O1—Cu1125.9 (4)C8—C9—C8i112.2 (8)
C7—N1—C8118.8 (6)C8—C9—C10110.2 (6)
C7—N1—Cu1125.8 (4)C8i—C9—C10106.9 (6)
C8—N1—Cu1115.0 (5)C8—C9—C10i106.9 (6)
O1—C1—C6124.5 (6)C8i—C9—C10i110.2 (6)
O1—C1—C2117.8 (7)C10—C9—C10i110.5 (11)
C6—C1—C2117.6 (8)C4—C5—C6123.4 (8)
C3—C2—C1120.8 (8)C4—C5—H5118.3
C3—C2—H2119.6C6—C5—H5118.3
C1—C2—H2119.6C4—C11—H11B109.5
C2—C3—C4122.5 (7)C4—C11—H11A109.5
C2—C3—H3118.8H11B—C11—H11A109.5
C4—C3—H3118.8C4—C11—H11C109.5
C5—C4—C3115.8 (8)H11B—C11—H11C109.5
C5—C4—C11121.0 (9)H11A—C11—H11C109.5
C3—C4—C11123.1 (8)C9—C10—H10B109.5
C1—C6—C5119.4 (7)C9—C10—H10A109.5
C1—C6—C7123.4 (7)H10B—C10—H10A109.5
C5—C6—C7117.1 (7)C9—C10—H10C109.5
N1—C7—C6124.9 (7)H10B—C10—H10C109.5
N1—C7—H7117.5H10A—C10—H10C109.5
C6—C7—H7117.5
O1i—Cu1—O1—C1−166.5 (8)C2—C1—C6—C5−2.8 (12)
N1i—Cu1—O1—C192.1 (9)O1—C1—C6—C7−7.9 (13)
N1—Cu1—O1—C1−10.9 (7)C2—C1—C6—C7176.4 (8)
O1i—Cu1—N1—C7101.3 (8)C8—N1—C7—C6178.2 (8)
O1—Cu1—N1—C70.5 (8)Cu1—N1—C7—C65.8 (13)
N1i—Cu1—N1—C7−155.3 (9)C1—C6—C7—N1−3.6 (14)
O1i—Cu1—N1—C8−71.3 (8)C5—C6—C7—N1175.7 (8)
O1—Cu1—N1—C8−172.1 (6)C7—N1—C8—C9116.3 (8)
N1i—Cu1—N1—C832.1 (4)Cu1—N1—C8—C9−70.5 (7)
Cu1—O1—C1—C615.7 (11)N1—C8—C9—C8i35.3 (4)
Cu1—O1—C1—C2−168.6 (6)N1—C8—C9—C10−83.7 (9)
O1—C1—C2—C3−174.8 (8)N1—C8—C9—C10i156.2 (8)
C6—C1—C2—C31.2 (14)C3—C4—C5—C66.1 (15)
C1—C2—C3—C44.2 (15)C11—C4—C5—C6−177.9 (9)
C2—C3—C4—C5−7.7 (15)C1—C6—C5—C4−1.0 (14)
C2—C3—C4—C11176.4 (10)C7—C6—C5—C4179.7 (9)
O1—C1—C6—C5172.9 (8)
D—H···AD—HH···AD···AD—H···A
O1W—H1W1···O10.852.462.783 (7)103
O1W—H1W1···O1i0.852.442.783 (7)105
C3—H3···O1Wii0.932.553.48 (1)173
C8—H8B···Cg1iii0.972.833.693 (9)148
C11—H11B···Cg1iv0.962.983.850 (12)151
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H1W1⋯O10.852.462.783 (7)103
O1W—H1W1⋯O1i 0.852.442.783 (7)105
C3—H3⋯O1W ii 0.932.553.48 (1)173
C8—H8BCg1iii 0.972.833.693 (9)148
C11—H11BCg1iv 0.962.983.850 (12)151

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  {4,4'-Dichloro-2,2'-[2,2-dimethyl-propane-1,3-diylbis(nitrilo-methanyl-ylidene)]diphenolato-κO,N,N',O'}nickel(II).

Authors:  Hadi Kargar; Reza Kia; Elham Pahlavani; Muhammad Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-18

3.  {5,5'-Dimeth-oxy-2,2'-[1,1'-(2,2-dimethyl-propane-1,3-diyldinitrilo)-diethyl-idyne]diphenolato-κO,N,N',O'}copper(II) monohydrate.

Authors:  Akbar Ghaemi; Saeed Rayati; Ehsan Elahi; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30

4.  {4,4'-Dimethyl-2,2'-[(2,2-dimethyl-propane-1,3-di-yl)bis-(nitrilo-methanylyl-idene)]diphenolato}nickel(II) monohydrate.

Authors:  Hadi Kargar; Reza Kia; Zahra Sharafi; Muhammad Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-23

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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