Literature DB >> 22969462

Bis(2-hy-droxy-imino-methyl-6-meth-oxy-phenolato-κ(2)N,O(1))copper(II).

Svitlana R Petrusenko, Yaroslava I Belozub, Volodymyr N Kokozay, Irina V Omelchenko.   

Abstract

In the title compound, [Cu(C(8)H(8)NO(3))(2)], the nearly planar mol-ecule (r.m.s. deviation = 0.037 Å) is centrosymmetric with the Cu(II) atom lying on an inversion center. The Cu(II) atom is tetra-coordinated, displaying a slightly distorted square-planar geometry. The main deviation from the ideal geometry is seen in the differences in the Cu-O [1.8833 (10) Å] and Cu-N [1.9405 (13) Å] bond lengths, while angular deviations are less than 3°. Intra-molecular O-H⋯O and inter-molecular Csp(2)-H⋯O hydrogen bonds form S(5) and R(2) (2)(8) ring motifs, respectively. The latter inter-action results in chains of mol-ecules along [100].

Entities:  

Year:  2012        PMID: 22969462      PMCID: PMC3435589          DOI: 10.1107/S1600536812032187

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Zhang et al. (2008 ▶); Li et al. (2004 ▶), 2009 ▶). For bond-valence-sum calculations, see: Brown & Altermatt (1985 ▶). For in situ formation of polydentate ligands, see: Coxall et al. (2000 ▶). For background to direct synthesis, see: Makhankova (2011 ▶).

Experimental

Crystal data

[Cu(C8H8NO3)2] M = 395.85 Monoclinic, a = 8.4906 (4) Å b = 4.8997 (2) Å c = 18.9309 (9) Å β = 94.906 (4)° V = 784.67 (6) Å3 Z = 2 Mo Kα radiation μ = 1.43 mm−1 T = 293 K 0.50 × 0.20 × 0.10 mm

Data collection

Oxford Diffraction Xcalibur/Sapphire3 diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2010 ▶) T min = 0.535, T max = 0.763 8497 measured reflections 2245 independent reflections 1816 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.077 S = 1.01 2245 reflections 132 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.39 e Å−3 Δρmin = −0.19 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2010 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812032187/lr2071sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032187/lr2071Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C8H8NO3)2]F(000) = 406
Mr = 395.85Dx = 1.675 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2721 reflections
a = 8.4906 (4) Åθ = 3.1–32.2°
b = 4.8997 (2) ŵ = 1.43 mm1
c = 18.9309 (9) ÅT = 293 K
β = 94.906 (4)°Needle, gold–green
V = 784.67 (6) Å30.50 × 0.20 × 0.10 mm
Z = 2
Oxford Diffraction Xcalibur/Sapphire3 diffractometer2245 independent reflections
Radiation source: Enhance (Mo) X-ray Source1816 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.020
Detector resolution: 16.1827 pixels mm-1θmax = 30.0°, θmin = 3.9°
ω scansh = −11→11
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2010)k = −6→6
Tmin = 0.535, Tmax = 0.763l = −26→26
8497 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: difference Fourier map
wR(F2) = 0.077H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.0486P)2] where P = (Fo2 + 2Fc2)/3
2245 reflections(Δ/σ)max = 0.001
132 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.19 e Å3
11 constraints
Experimental. CrysAlis RED, Oxford Diffraction Ltd., 2010. Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.50000.50000.03633 (10)
N10.27576 (15)0.5566 (3)0.50728 (7)0.0398 (3)
C10.60680 (18)0.0698 (3)0.59715 (8)0.0378 (3)
O10.49066 (12)0.2223 (2)0.56829 (5)0.0446 (2)
O20.41409 (14)−0.1275 (2)0.66227 (6)0.0541 (3)
C20.56941 (19)−0.1252 (3)0.64921 (7)0.0416 (3)
O30.20159 (13)0.3924 (3)0.55453 (6)0.0518 (3)
H3O0.26650.28790.57450.078*
C30.6860 (2)−0.2899 (3)0.68168 (8)0.0488 (4)
H30.6603−0.41640.71550.059*
C40.8415 (2)−0.2687 (3)0.66435 (8)0.0512 (4)
H40.9189−0.38140.68650.061*
C50.8809 (2)−0.0838 (4)0.61520 (9)0.0467 (3)
H50.9853−0.07000.60430.056*
C60.76430 (18)0.0881 (3)0.58031 (8)0.0393 (3)
C70.81554 (18)0.2753 (3)0.52815 (8)0.0420 (3)
H70.920 (2)0.279 (4)0.5214 (9)0.054 (5)*
C80.3647 (3)−0.3339 (4)0.70831 (10)0.0572 (4)
H8A0.392 (3)−0.514 (4)0.6925 (12)0.050 (6)*
H8B0.418 (3)−0.314 (4)0.7595 (12)0.072 (6)*
H8C0.255 (3)−0.322 (4)0.7053 (10)0.064 (6)*
U11U22U33U12U13U23
Cu10.03102 (14)0.03680 (14)0.04131 (15)−0.00245 (9)0.00388 (9)0.00387 (9)
N10.0332 (6)0.0452 (6)0.0413 (6)−0.0056 (5)0.0060 (5)0.0017 (5)
C10.0405 (7)0.0349 (6)0.0379 (7)−0.0014 (6)0.0017 (6)−0.0020 (5)
O10.0358 (5)0.0457 (5)0.0525 (5)0.0010 (4)0.0052 (4)0.0134 (5)
O20.0521 (7)0.0494 (6)0.0621 (7)−0.0034 (5)0.0118 (5)0.0163 (6)
C20.0463 (8)0.0360 (7)0.0422 (7)−0.0041 (6)0.0021 (6)−0.0008 (6)
O30.0370 (5)0.0640 (7)0.0550 (6)−0.0058 (6)0.0083 (5)0.0176 (6)
C30.0611 (10)0.0393 (7)0.0451 (7)−0.0020 (7)−0.0013 (7)0.0044 (6)
C40.0554 (9)0.0464 (8)0.0499 (8)0.0099 (7)−0.0072 (7)−0.0004 (7)
C50.0402 (8)0.0483 (7)0.0505 (8)0.0060 (7)−0.0024 (7)−0.0055 (7)
C60.0391 (7)0.0369 (6)0.0410 (7)0.0000 (6)−0.0009 (6)−0.0049 (6)
C70.0320 (7)0.0477 (8)0.0463 (7)−0.0020 (6)0.0033 (6)−0.0023 (6)
C80.0656 (12)0.0517 (9)0.0560 (10)−0.0083 (9)0.0151 (9)0.0089 (8)
Cu1—O1i1.8833 (10)C3—C41.392 (3)
Cu1—O11.8833 (10)C3—H30.9300
Cu1—N11.9405 (13)C4—C51.361 (2)
Cu1—N1i1.9405 (13)C4—H40.9300
N1—C7i1.281 (2)C5—C61.419 (2)
N1—O31.3928 (17)C5—H50.9300
C1—O11.3179 (17)C6—C71.442 (2)
C1—C61.404 (2)C7—N1i1.281 (2)
C1—C21.428 (2)C7—H70.903 (19)
O2—C21.362 (2)C8—H8A0.965 (18)
O2—C81.422 (2)C8—H8B1.04 (2)
C2—C31.380 (2)C8—H8C0.93 (2)
O3—H3O0.8200
O1i—Cu1—O1180.0C4—C3—H3119.7
O1i—Cu1—N192.56 (5)C5—C4—C3120.27 (15)
O1—Cu1—N187.44 (5)C5—C4—H4119.9
O1i—Cu1—N1i87.44 (5)C3—C4—H4119.9
O1—Cu1—N1i92.56 (5)C4—C5—C6120.76 (16)
N1—Cu1—N1i180.00 (8)C4—C5—H5119.6
C7i—N1—O3114.91 (13)C6—C5—H5119.6
C7i—N1—Cu1127.46 (11)C1—C6—C5119.77 (15)
O3—N1—Cu1117.60 (10)C1—C6—C7123.03 (14)
O1—C1—C6124.28 (14)C5—C6—C7117.20 (15)
O1—C1—C2117.57 (14)N1i—C7—C6124.28 (14)
C6—C1—C2118.15 (14)N1i—C7—H7117.8 (12)
C1—O1—Cu1128.33 (10)C6—C7—H7117.8 (12)
C2—O2—C8117.25 (14)O2—C8—H8A111.8 (14)
O2—C2—C3125.65 (14)O2—C8—H8B112.2 (12)
O2—C2—C1113.99 (13)H8A—C8—H8B106.2 (18)
C3—C2—C1120.35 (15)O2—C8—H8C105.2 (13)
N1—O3—H3O109.5H8A—C8—H8C107.6 (19)
C2—C3—C4120.69 (15)H8B—C8—H8C113.9 (17)
C2—C3—H3119.7
O1i—Cu1—N1—C7i2.42 (14)C6—C1—C2—C30.0 (2)
O1—Cu1—N1—C7i−177.58 (14)O2—C2—C3—C4−179.65 (14)
O1i—Cu1—N1—O3−179.73 (11)C1—C2—C3—C40.1 (2)
O1—Cu1—N1—O30.27 (11)C2—C3—C4—C50.3 (2)
C6—C1—O1—Cu1−0.8 (2)C3—C4—C5—C6−0.6 (2)
C2—C1—O1—Cu1178.82 (10)O1—C1—C6—C5179.24 (14)
N1—Cu1—O1—C1−177.96 (12)C2—C1—C6—C5−0.4 (2)
N1i—Cu1—O1—C12.04 (12)O1—C1—C6—C7−1.0 (2)
C8—O2—C2—C3−6.2 (2)C2—C1—C6—C7179.38 (13)
C8—O2—C2—C1174.03 (14)C4—C5—C6—C10.7 (2)
O1—C1—C2—O20.10 (19)C4—C5—C6—C7−179.06 (14)
C6—C1—C2—O2179.74 (13)C1—C6—C7—N1i0.6 (2)
O1—C1—C2—C3−179.64 (13)C5—C6—C7—N1i−179.65 (15)
D—H···AD—HH···AD···AD—H···A
O3—H3O···O10.821.942.5840 (16)134
C7—H7···O3ii0.903 (19)2.49 (2)3.3231 (19)154.3 (15)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3O⋯O10.821.942.5840 (16)134
C7—H7⋯O3i 0.903 (19)2.49 (2)3.3231 (19)154.3 (15)

Symmetry code: (i) .

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