Literature DB >> 22969438

Redetermination of the low-temperature polymorph of Li(2)MnSiO(4) from single-crystal X-ray data.

Mineo Sato, Tadashi Ishigaki, Kazuyoshi Uematsu, Kenji Toda, Hirokazu Okawa.   

Abstract

Crystals of dilithium manganese(II) silicate were grown under high-temperature hydro-thermal conditions in the system LiOH-MnO(2)-SiO(2). The title compound crystallizes in the β(II)-Li(3)PO(4) structure type. The coordination polyhedra of all cations are slightly distorted tetra-hedra (m symmetry for MnO(4) and SiO(4)), which are linked by corner-sharing to each other. The vertices of the tetra-hedra point to the same direction perpendicular to the distorted hexa-gonal close-packed (hcp) array of O atoms within which half of the tetra-hedral voids are occupied by cations. In comparison with the previous refinement from powder X-ray data [Dominko et al. (2006 ▶). Electrochem. Commun.8, 217-222], the present reinvestigation from single-crystal X-ray data allows a more precise determination of the distribution of the Li(+) and Mn(2+) cations, giving a perfectly site-ordered structure model for both Li(+) and Mn(2+).

Entities:  

Year:  2012        PMID: 22969438      PMCID: PMC3435565          DOI: 10.1107/S1600536812035040

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to structural studies of Li2 MSiO4 (M = Mn, Fe, Co) compounds, see: Islam et al. (2011 ▶); Santamaría-Pérez et al. (2012 ▶); Setoguchi (1988 ▶); Yamaguchi et al. (1979 ▶). Polymorphism of Li2MnSiO4 was reported by Arroyo-de Dompablo et al. (2006 ▶, 2008 ▶); Belharouak et al. (2009 ▶); Dominko et al. (2006 ▶); Kokalj et al. (2007 ▶); Politaev et al. (2007 ▶); Wu et al. (2009 ▶); Zhong et al. (2010 ▶). For notation of Li3PO4 polymorphs, see: West & Glasser (1972 ▶). For theo­retical studies of the redox potentials and Li migration paths of Li2MnSiO4, see: Kuganathan & Islam (2009 ▶); Mali et al. (2010 ▶); Duncan et al. (2011 ▶), and for NMR studies of this material, see: Sirisopanaporn et al. (2011 ▶). For the bond-valence method, see: Brown & Altermatt (1985 ▶). For crystallographic background, see: Cooper et al. (2002 ▶).

Experimental

Crystal data

Li2MnSiO4 M = 160.91 Orthorhombic, a = 6.3133 (16) Å b = 5.3677 (14) Å c = 4.9685 (12) Å V = 168.37 (7) Å3 Z = 2 Mo Kα radiation μ = 4.11 mm−1 T = 295 K 0.26 × 0.19 × 0.18 mm

Data collection

Rigaku Mercury375R diffractometer Absorption correction: multi-scan (REQAB; Rigaku, 1998 ▶) T min = 0.377, T max = 0.477 1636 measured reflections 423 independent reflections 419 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.015 wR(F 2) = 0.037 S = 1.14 423 reflections 45 parameters 1 restraint Δρmax = 0.25 e Å−3 Δρmin = −0.62 e Å−3 Absolute structure: Flack (1983 ▶), 189 Friedel pairs Flack parameter: 0.171 (15) Data collection: CrystalClear (Rigaku, 2010 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: VESTA (Momma & Izumi, 2011 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812035040/wm2658sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812035040/wm2658Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Li2MnSiO4F(000) = 154
Mr = 160.91Dx = 3.174 Mg m3
Orthorhombic, Pmn21Mo Kα radiation, λ = 0.71069 Å
Hall symbol: P 2ac -2Cell parameters from 1684 reflections
a = 6.3133 (16) Åθ = 3.2–27.5°
b = 5.3677 (14) ŵ = 4.11 mm1
c = 4.9685 (12) ÅT = 295 K
V = 168.37 (7) Å3Prism, light green
Z = 20.26 × 0.19 × 0.18 mm
Rigaku Mercury375R diffractometer423 independent reflections
Radiation source: Sealed Tube419 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.019
Detector resolution: 13.6612 pixels mm-1θmax = 27.4°, θmin = 3.8°
profile data from ω–scansh = −8→8
Absorption correction: multi-scan (REQAB; Rigaku, 1998)k = −6→6
Tmin = 0.377, Tmax = 0.477l = −6→6
1636 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullw = 1/[σ2(Fo2) + (0.0217P)2] where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.015(Δ/σ)max < 0.001
wR(F2) = 0.037Δρmax = 0.25 e Å3
S = 1.14Δρmin = −0.62 e Å3
423 reflectionsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
45 parametersExtinction coefficient: 0.392 (13)
1 restraintAbsolute structure: Flack (1983), 189 Friedel pairs
0 constraintsFlack parameter: 0.171 (15)
Primary atom site location: structure-invariant direct methods
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Li10.7503 (4)−0.1688 (4)0.995 (5)0.0090 (7)
Mn10.50.33172 (5)0.99680.00733 (15)
Si110.32090 (9)0.9851 (3)0.00350 (17)
O10.50.6868 (3)1.1569 (5)0.0071 (5)
O20.50.3867 (3)0.5804 (4)0.0081 (4)
O30.7887 (2)0.1799 (2)1.0979 (4)0.0075 (3)
U11U22U33U12U13U23
Li10.0084 (17)0.0061 (15)0.0125 (15)−0.0009 (7)0.0000 (14)−0.002 (2)
Mn10.0055 (2)0.0072 (2)0.0093 (2)000.0000 (2)
Si10.0035 (3)0.0028 (3)0.0042 (4)00−0.0003 (3)
O10.0075 (9)0.0083 (8)0.0056 (11)00−0.0004 (6)
O20.0098 (8)0.0048 (7)0.0096 (10)000.0001 (7)
O30.0068 (5)0.0067 (6)0.0089 (7)−0.0009 (4)0.0008 (7)0.0000 (5)
Li1—O1i1.936 (10)Mn1—O12.065 (2)
Li1—O31.956 (6)Mn1—O22.090 (2)
Li1—O3ii1.99 (2)Si1—O1v1.631 (3)
Li1—O2iii2.009 (6)Si1—O31.6331 (17)
Mn1—O3iv2.0585 (16)Si1—O3vi1.6331 (17)
Mn1—O32.0585 (15)Si1—O2vii1.639 (2)
O1i—Li1—O3112.0 (7)O3iv—Mn1—O2107.31 (6)
O1i—Li1—O3ii107.5 (5)O3—Mn1—O2107.31 (6)
O3—Li1—O3ii107.7 (7)O1—Mn1—O2104.54 (8)
O1i—Li1—O2iii108.6 (6)O1v—Si1—O3109.35 (10)
O3—Li1—O2iii113.9 (5)O1v—Si1—O3vi109.35 (10)
O3ii—Li1—O2iii106.8 (6)O3—Si1—O3vi109.58 (13)
O3iv—Mn1—O3124.58 (8)O1v—Si1—O2vii108.23 (13)
O3iv—Mn1—O1105.74 (5)O3—Si1—O2vii110.16 (10)
O3—Mn1—O1105.74 (5)O3vi—Si1—O2vii110.16 (10)
AtomSitePresent workDominko et al.1)Arroyo-de Dompablo et al.2)
Li4b1.02 (6)1.0 (1)0.9
Mn2a1.89 (5)2.1 (1)1.77
Si2a3.89 (7)3.6 (2)3.65
O12a2.02 (9)1.9 (3)1.75
O24b1.97 (7)1.9 (2)1.86
O32a1.87 (7)2.0 (2)1.90
Li1—O1i 1.936 (10)
Li1—O31.956 (6)
Li1—O3ii 1.99 (2)
Li1—O2iii 2.009 (6)
Mn1—O3iv 2.0585 (16)
Mn1—O12.065 (2)
Mn1—O22.090 (2)
Si1—O1v 1.631 (3)
Si1—O31.6331 (17)
Si1—O2vi 1.639 (2)
O1i—Li1—O3112.0 (7)
O1i—Li1—O3ii 107.5 (5)
O3—Li1—O3ii 107.7 (7)
O1i—Li1—O2iii 108.6 (6)
O3—Li1—O2iii 113.9 (5)
O3ii—Li1—O2iii 106.8 (6)
O3iv—Mn1—O3124.58 (8)
O3iv—Mn1—O1105.74 (5)
O3iv—Mn1—O2107.31 (6)
O1—Mn1—O2104.54 (8)
O1v—Si1—O3109.35 (10)
O3—Si1—O3vii 109.58 (13)
O1v—Si1—O2vi 108.23 (13)
O3—Si1—O2vi 110.16 (10)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

Table 2

Bond-valence parameters derived from the present model and the previous studies.

AtomSitePresent workDominko et al. 1) Arroyo-de Dompablo et al. 2)
Li4b 1.02 (6)1.0 (1)0.9
Mn2a 1.89 (5)2.1 (1)1.77
Si2a 3.89 (7)3.6 (2)3.65
O12a 2.02 (9)1.9 (3)1.75
O24b 1.97 (7)1.9 (2)1.86
O32a 1.87 (7)2.0 (2)1.90

1) The data, referred to Dominko et al. (2006 ▶), are based on the coordinates for primary MO4 (M = Li, Mn, Si) tetra­hedra. 2) The data, referred to Arroyo-de Dompablo et al. (2008 ▶), are based on the coordinates for primary MO4 (M = Li, Mn, Si) tetra­hedra optimized by density functional theory (DFT) methods.

  3 in total

1.  6Li MAS NMR spectroscopy and first-principles calculations as a combined tool for the investigation of Li2MnSiO4 polymorphs.

Authors:  Gregor Mali; Anton Meden; Robert Dominko
Journal:  Chem Commun (Camb)       Date:  2010-04-06       Impact factor: 6.222

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  High-pressure investigation of Li2MnSiO4 and Li2CoSiO4 electrode materials for lithium-ion batteries.

Authors:  D Santamaría-Pérez; U Amador; J Tortajada; R Dominko; M E Arroyo-de Dompablo
Journal:  Inorg Chem       Date:  2012-05-09       Impact factor: 5.165

  3 in total

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